Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC005790.1-201ENST00000619774 450 ntBASIC7.36□□□□□ -1.23
PCDH1Q08174 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.36□□□□□ -1.23
PCDH1Q08174 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDH1Q08174 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PCDH1Q08174 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
PCDH1Q08174 HSPA8P11-201ENST00000508840 1898 ntBASIC7.36□□□□□ -1.23
PCDH1Q08174 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDH1Q08174 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDH1Q08174 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
PCDH1Q08174 AL353795.1-201ENST00000439134 1775 ntBASIC7.36□□□□□ -1.23
PCDH1Q08174 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDH1Q08174 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDH1Q08174 EEF1A1P4-201ENST00000359165 1405 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 MARK2P10-201ENST00000454959 1437 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDH1Q08174 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDH1Q08174 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDH1Q08174 AC087359.1-201ENST00000508335 1740 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDH1Q08174 NEPNP-201ENST00000404786 1371 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDH1Q08174 SLC9B1P3-201ENST00000452667 1334 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
PCDH1Q08174 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDH1Q08174 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
PCDH1Q08174 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
PCDH1Q08174 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDH1Q08174 AMELY-202ENST00000383036 621 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDH1Q08174 SNORA68-201ENST00000384437 133 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 MIR614-201ENST00000385082 90 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 SNORD65C-201ENST00000390962 71 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 ZNF603P-201ENST00000405613 487 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 USP9YP33-201ENST00000412220 421 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC7.35□□□□□ -1.23
PCDH1Q08174 AC003071.2-201ENST00000423857 315 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 ETF1P3-201ENST00000430422 1160 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDH1Q08174 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDH1Q08174 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDH1Q08174 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDH1Q08174 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDH1Q08174 AL137074.1-201ENST00000442640 465 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDH1Q08174 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDH1Q08174 SUMO2P2-201ENST00000456482 255 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
PCDH1Q08174 AC026254.1-201ENST00000479473 431 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 ANK3-213ENST00000486349 493 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDH1Q08174 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDH1Q08174 CDC42P4-201ENST00000510507 563 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDH1Q08174 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDH1Q08174 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDH1Q08174 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDH1Q08174 MTCO3P15-201ENST00000526563 574 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 OR4A6P-201ENST00000534364 970 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDH1Q08174 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.35□□□□□ -1.23
PCDH1Q08174 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
PCDH1Q08174 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDH1Q08174 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
PCDH1Q08174 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC7.35□□□□□ -1.23
PCDH1Q08174 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.35□□□□□ -1.23
PCDH1Q08174 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDH1Q08174 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDH1Q08174 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDH1Q08174 ULK4P3-201ENST00000563895 440 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 MIR4793-201ENST00000577502 87 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDH1Q08174 MIR4642-201ENST00000583943 82 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC7.35□□□□□ -1.23
PCDH1Q08174 AC005495.1-201ENST00000586611 1211 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 AC022146.1-201ENST00000595307 847 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDH1Q08174 AL512430.4-201ENST00000603085 613 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDH1Q08174 AC016394.1-201ENST00000608444 833 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 AC138749.5-201ENST00000611461 208 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 AP003789.1-201ENST00000617737 605 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 AL356266.1-201ENST00000623311 483 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PCDH1Q08174 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDH1Q08174 RPL36AP21-202ENST00000639134 430 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 ZNF663P-202ENST00000641770 1131 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
PCDH1Q08174 AL445250.1-203ENST00000641829 1535 ntBASIC7.35□□□□□ -1.23
PCDH1Q08174 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PCDH1Q08174 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDH1Q08174 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDH1Q08174 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
PCDH1Q08174 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDH1Q08174 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDH1Q08174 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDH1Q08174 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDH1Q08174 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDH1Q08174 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDH1Q08174 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PCDH1Q08174 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms