Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CL1P78423 AC068769.1-201ENST00000474767 2426 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CL1P78423 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CL1P78423 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CX3CL1P78423 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CL1P78423 RNA5SP382-201ENST00000363355 112 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 RN7SKP191-201ENST00000364713 306 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.31□□□□□ -1.56
CX3CL1P78423 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CX3CL1P78423 AC007068.1-201ENST00000396690 844 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 AP003170.5-201ENST00000397185 335 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 OR1F12-201ENST00000402365 945 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 NPM1P38-201ENST00000403835 865 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CX3CL1P78423 AL589655.1-201ENST00000405398 482 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CL1P78423 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.31□□□□□ -1.56
CX3CL1P78423 RN7SKP296-201ENST00000411185 341 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.31□□□□□ -1.56
CX3CL1P78423 AHCYP8-201ENST00000425108 209 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.31□□□□□ -1.56
CX3CL1P78423 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.31□□□□□ -1.56
CX3CL1P78423 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.31□□□□□ -1.56
CX3CL1P78423 H3F3BP1-201ENST00000440551 403 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 BMS1P11-201ENST00000442351 885 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC5.31□□□□□ -1.56
CX3CL1P78423 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.31□□□□□ -1.56
CX3CL1P78423 RPL26P30-201ENST00000453533 435 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 BMS1P9-201ENST00000457640 885 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 RN7SL372P-201ENST00000461982 298 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 AC018639.1-201ENST00000492994 442 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 AC138409.2-202ENST00000507274 458 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.31□□□□□ -1.56
CX3CL1P78423 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.31□□□□□ -1.56
CX3CL1P78423 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CX3CL1P78423 SETP21-201ENST00000514799 892 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.31□□□□□ -1.56
CX3CL1P78423 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.31□□□□□ -1.56
CX3CL1P78423 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.31□□□□□ -1.56
CX3CL1P78423 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.31□□□□□ -1.56
CX3CL1P78423 OR10D4P-201ENST00000525892 951 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 OR7E10P-201ENST00000526420 991 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 KCTD9P4-201ENST00000526766 1166 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.31□□□□□ -1.56
CX3CL1P78423 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CX3CL1P78423 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.31□□□□□ -1.56
CX3CL1P78423 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.31□□□□□ -1.56
CX3CL1P78423 AL445383.1-201ENST00000554689 874 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.31□□□□□ -1.56
CX3CL1P78423 ANP32BP1-202ENST00000568553 737 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 AC106785.4-201ENST00000569492 412 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.31□□□□□ -1.56
CX3CL1P78423 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.31□□□□□ -1.56
CX3CL1P78423 AC011921.2-201ENST00000589465 152 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.31□□□□□ -1.56
CX3CL1P78423 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.31□□□□□ -1.56
CX3CL1P78423 MIR6883-201ENST00000614952 78 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 AL445649.1-201ENST00000615941 691 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 AP000720.1-201ENST00000625091 483 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.31□□□□□ -1.56
CX3CL1P78423 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CL1P78423 AL161901.1-201ENST00000624954 3425 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CX3CL1P78423 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CX3CL1P78423 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CL1P78423 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.31□□□□□ -1.56
CX3CL1P78423 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CL1P78423 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CL1P78423 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CX3CL1P78423 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CX3CL1P78423 AC007012.2-201ENST00000623206 1676 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.31□□□□□ -1.56
CX3CL1P78423 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CL1P78423 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.31□□□□□ -1.56
CX3CL1P78423 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CL1P78423 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CL1P78423 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.3□□□□□ -1.56
CX3CL1P78423 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CL1P78423 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CL1P78423 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CL1P78423 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
CX3CL1P78423 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.3□□□□□ -1.56
CX3CL1P78423 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
CX3CL1P78423 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CL1P78423 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CL1P78423 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CL1P78423 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CX3CL1P78423 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CX3CL1P78423 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CL1P78423 AL359694.1-201ENST00000403247 604 ntBASIC5.3□□□□□ -1.56
CX3CL1P78423 AL049697.3-201ENST00000406493 982 ntBASIC5.3□□□□□ -1.56
CX3CL1P78423 RNA5SP251-201ENST00000410614 137 ntBASIC5.3□□□□□ -1.56
CX3CL1P78423 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.3□□□□□ -1.56
CX3CL1P78423 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.3□□□□□ -1.56
CX3CL1P78423 AL356806.1-201ENST00000422524 916 ntBASIC5.3□□□□□ -1.56
CX3CL1P78423 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CL1P78423 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.3□□□□□ -1.56
CX3CL1P78423 ZFAND6P1-201ENST00000434138 605 ntBASIC5.3□□□□□ -1.56
CX3CL1P78423 RPS15AP29-201ENST00000445539 400 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms