Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 RN7SL868P-201ENST00000485915 303 ntBASIC5.49□□□□□ -1.53
ACTBP60709 AOX3P-204ENST00000491025 2107 ntBASIC5.49□□□□□ -1.53
ACTBP60709 AC090058.1-201ENST00000498788 435 ntBASIC5.49□□□□□ -1.53
ACTBP60709 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.49□□□□□ -1.53
ACTBP60709 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.49□□□□□ -1.53
ACTBP60709 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.49□□□□□ -1.53
ACTBP60709 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.49□□□□□ -1.53
ACTBP60709 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
ACTBP60709 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.49□□□□□ -1.53
ACTBP60709 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
ACTBP60709 RN7SL657P-201ENST00000582431 293 ntBASIC5.49□□□□□ -1.53
ACTBP60709 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC5.49□□□□□ -1.53
ACTBP60709 AC099777.1-201ENST00000603779 1070 ntBASIC5.49□□□□□ -1.53
ACTBP60709 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.49□□□□□ -1.53
ACTBP60709 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.49□□□□□ -1.53
ACTBP60709 AC116667.2-201ENST00000641075 823 ntBASIC5.49□□□□□ -1.53
ACTBP60709 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ACTBP60709 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
ACTBP60709 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.49□□□□□ -1.53
ACTBP60709 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
ACTBP60709 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.49□□□□□ -1.53
ACTBP60709 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ACTBP60709 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ACTBP60709 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
ACTBP60709 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ACTBP60709 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ACTBP60709 LINC02019-201ENST00000608605 2060 ntBASIC5.49□□□□□ -1.53
ACTBP60709 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ACTBP60709 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.49□□□□□ -1.53
ACTBP60709 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ACTBP60709 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.49□□□□□ -1.53
ACTBP60709 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ACTBP60709 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ACTBP60709 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ACTBP60709 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ACTBP60709 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.48□□□□□ -1.53
ACTBP60709 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ACTBP60709 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
ACTBP60709 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.48□□□□□ -1.53
ACTBP60709 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ACTBP60709 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.48□□□□□ -1.53
ACTBP60709 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ACTBP60709 AC023245.2-201ENST00000530760 2978 ntBASIC5.48□□□□□ -1.53
ACTBP60709 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.48□□□□□ -1.53
ACTBP60709 PROS2P-201ENST00000474651 1951 ntBASIC5.48□□□□□ -1.53
ACTBP60709 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
ACTBP60709 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.48□□□□□ -1.53
ACTBP60709 MIR187-201ENST00000385062 109 ntBASIC5.48□□□□□ -1.53
ACTBP60709 RNA5SP176-201ENST00000390956 110 ntBASIC5.48□□□□□ -1.53
ACTBP60709 AL359092.1-201ENST00000417156 265 ntBASIC5.48□□□□□ -1.53
ACTBP60709 AC091492.1-201ENST00000419844 272 ntBASIC5.48□□□□□ -1.53
ACTBP60709 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.48□□□□□ -1.53
ACTBP60709 RPL23AP85-201ENST00000421838 433 ntBASIC5.48□□□□□ -1.53
ACTBP60709 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.48□□□□□ -1.53
ACTBP60709 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.48□□□□□ -1.53
ACTBP60709 MTND1P10-201ENST00000426108 832 ntBASIC5.48□□□□□ -1.53
ACTBP60709 AL158214.1-201ENST00000444423 404 ntBASIC5.48□□□□□ -1.53
ACTBP60709 AC009963.4-201ENST00000448535 339 ntBASIC5.48□□□□□ -1.53
ACTBP60709 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.48□□□□□ -1.53
ACTBP60709 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.48□□□□□ -1.53
ACTBP60709 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.48□□□□□ -1.53
ACTBP60709 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.48□□□□□ -1.53
ACTBP60709 AC105391.1-201ENST00000503155 1045 ntBASIC5.48□□□□□ -1.53
ACTBP60709 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.48□□□□□ -1.53
ACTBP60709 AC106800.3-201ENST00000511389 308 ntBASIC5.48□□□□□ -1.53
ACTBP60709 AC114940.1-201ENST00000512162 1265 ntBASIC5.48□□□□□ -1.53
ACTBP60709 RNA5SP75-201ENST00000516841 111 ntBASIC5.48□□□□□ -1.53
ACTBP60709 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.48□□□□□ -1.53
ACTBP60709 CARSP2-201ENST00000520688 277 ntBASIC5.48□□□□□ -1.53
ACTBP60709 AC008429.4-201ENST00000521201 182 ntBASIC5.48□□□□□ -1.53
ACTBP60709 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ACTBP60709 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
ACTBP60709 AL445383.1-201ENST00000554689 874 ntBASIC5.48□□□□□ -1.53
ACTBP60709 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.48□□□□□ -1.53
ACTBP60709 AL121579.2-201ENST00000555466 590 ntBASIC5.48□□□□□ -1.53
ACTBP60709 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.48□□□□□ -1.53
ACTBP60709 RN7SL131P-201ENST00000579043 256 ntBASIC5.48□□□□□ -1.53
ACTBP60709 FCGR1CP-201ENST00000579737 1127 ntBASIC5.48□□□□□ -1.53
ACTBP60709 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.48□□□□□ -1.53
ACTBP60709 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.48□□□□□ -1.53
ACTBP60709 AL021368.3-201ENST00000607119 578 ntBASIC5.48□□□□□ -1.53
ACTBP60709 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC5.48□□□□□ -1.53
ACTBP60709 AC069234.4-201ENST00000621276 412 ntBASIC5.48□□□□□ -1.53
ACTBP60709 AC069542.2-201ENST00000624816 216 ntBASIC5.48□□□□□ -1.53
ACTBP60709 AC073857.1-201ENST00000625082 1054 ntBASIC5.48□□□□□ -1.53
ACTBP60709 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ACTBP60709 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ACTBP60709 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ACTBP60709 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.48□□□□□ -1.53
ACTBP60709 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
ACTBP60709 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.48□□□□□ -1.53
ACTBP60709 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ACTBP60709 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ACTBP60709 CCNT2P1-201ENST00000423082 1315 ntBASIC5.48□□□□□ -1.53
ACTBP60709 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
ACTBP60709 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ACTBP60709 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
ACTBP60709 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ACTBP60709 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ACTBP60709 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms