Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.55□□□□□ -1.36
CDH6P55285 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
CDH6P55285 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH6P55285 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH6P55285 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH6P55285 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDH6P55285 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
CDH6P55285 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CDH6P55285 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.55□□□□□ -1.36
CDH6P55285 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH6P55285 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH6P55285 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH6P55285 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH6P55285 CDY3P-201ENST00000454543 1618 ntBASIC6.54□□□□□ -1.36
CDH6P55285 AL353763.1-201ENST00000624467 1628 ntBASIC6.54□□□□□ -1.36
CDH6P55285 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
CDH6P55285 AC011504.1-201ENST00000623331 4103 ntBASIC6.54□□□□□ -1.36
CDH6P55285 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH6P55285 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH6P55285 AC092724.1-201ENST00000624623 3397 ntBASIC6.54□□□□□ -1.36
CDH6P55285 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CDH6P55285 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.54□□□□□ -1.36
CDH6P55285 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH6P55285 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CDH6P55285 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.54□□□□□ -1.36
CDH6P55285 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH6P55285 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH6P55285 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDH6P55285 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDH6P55285 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.54□□□□□ -1.36
CDH6P55285 RN7SKP237-201ENST00000364663 301 ntBASIC6.54□□□□□ -1.36
CDH6P55285 RNA5SP485-201ENST00000365053 119 ntBASIC6.54□□□□□ -1.36
CDH6P55285 LCN1P2-201ENST00000372030 223 ntBASIC6.54□□□□□ -1.36
CDH6P55285 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.54□□□□□ -1.36
CDH6P55285 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDH6P55285 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CDH6P55285 RPL21P50-201ENST00000417698 477 ntBASIC6.54□□□□□ -1.36
CDH6P55285 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.54□□□□□ -1.36
CDH6P55285 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.54□□□□□ -1.36
CDH6P55285 AL360013.1-201ENST00000419031 858 ntBASIC6.54□□□□□ -1.36
CDH6P55285 AC002127.1-201ENST00000421305 225 ntBASIC6.54□□□□□ -1.36
CDH6P55285 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
CDH6P55285 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.54□□□□□ -1.36
CDH6P55285 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.54□□□□□ -1.36
CDH6P55285 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.54□□□□□ -1.36
CDH6P55285 AC092601.1-201ENST00000444526 383 ntBASIC6.54□□□□□ -1.36
CDH6P55285 RBMY2HP-201ENST00000457961 720 ntBASIC6.54□□□□□ -1.36
CDH6P55285 RN7SL39P-201ENST00000462264 297 ntBASIC6.54□□□□□ -1.36
CDH6P55285 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.54□□□□□ -1.36
CDH6P55285 RN7SL643P-201ENST00000471845 291 ntBASIC6.54□□□□□ -1.36
CDH6P55285 RN7SL369P-201ENST00000477138 299 ntBASIC6.54□□□□□ -1.36
CDH6P55285 AOX3P-204ENST00000491025 2107 ntBASIC6.54□□□□□ -1.36
CDH6P55285 GM2AP2-201ENST00000491764 562 ntBASIC6.54□□□□□ -1.36
CDH6P55285 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.54□□□□□ -1.36
CDH6P55285 RNA5SP400-201ENST00000517155 111 ntBASIC6.54□□□□□ -1.36
CDH6P55285 AC135983.3-201ENST00000528049 1226 ntBASIC6.54□□□□□ -1.36
CDH6P55285 AC008055.1-201ENST00000547032 609 ntBASIC6.54□□□□□ -1.36
CDH6P55285 AC090115.2-201ENST00000548060 883 ntBASIC6.54□□□□□ -1.36
CDH6P55285 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.54□□□□□ -1.36
CDH6P55285 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDH6P55285 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.54□□□□□ -1.36
CDH6P55285 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.54□□□□□ -1.36
CDH6P55285 AC026898.1-201ENST00000586404 571 ntBASIC6.54□□□□□ -1.36
CDH6P55285 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.54□□□□□ -1.36
CDH6P55285 AL021368.3-201ENST00000607119 578 ntBASIC6.54□□□□□ -1.36
CDH6P55285 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.54□□□□□ -1.36
CDH6P55285 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.54□□□□□ -1.36
CDH6P55285 OR7E91P-202ENST00000642062 1198 ntBASIC6.54□□□□□ -1.36
CDH6P55285 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH6P55285 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.54□□□□□ -1.36
CDH6P55285 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CDH6P55285 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.54□□□□□ -1.36
CDH6P55285 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH6P55285 SHQ1P1-201ENST00000437111 1544 ntBASIC6.54□□□□□ -1.36
CDH6P55285 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
CDH6P55285 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDH6P55285 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDH6P55285 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH6P55285 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.53□□□□□ -1.36
CDH6P55285 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CDH6P55285 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.53□□□□□ -1.36
CDH6P55285 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.53□□□□□ -1.36
CDH6P55285 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDH6P55285 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CDH6P55285 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CDH6P55285 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH6P55285 AP001541.1-201ENST00000623322 1904 ntBASIC6.53□□□□□ -1.36
CDH6P55285 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CDH6P55285 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.53□□□□□ -1.36
CDH6P55285 OR11H13P-201ENST00000359695 979 ntBASIC6.53□□□□□ -1.36
CDH6P55285 RN7SKP184-201ENST00000362348 333 ntBASIC6.53□□□□□ -1.36
CDH6P55285 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.53□□□□□ -1.36
CDH6P55285 AL034417.1-201ENST00000399343 800 ntBASIC6.53□□□□□ -1.36
CDH6P55285 AL445238.1-204ENST00000400311 463 ntBASIC6.53□□□□□ -1.36
CDH6P55285 DHFRP2-201ENST00000414224 547 ntBASIC6.53□□□□□ -1.36
CDH6P55285 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.53□□□□□ -1.36
CDH6P55285 Z82198.3-201ENST00000421145 199 ntBASIC6.53□□□□□ -1.36
CDH6P55285 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH6P55285 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.53□□□□□ -1.36
CDH6P55285 EMC3-AS1-205ENST00000438698 534 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms