Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PMS1P54277 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC7.55□□□□□ -1.2
PMS1P54277 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
PMS1P54277 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.55□□□□□ -1.2
PMS1P54277 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.55□□□□□ -1.2
PMS1P54277 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PMS1P54277 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PMS1P54277 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PMS1P54277 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.55□□□□□ -1.2
PMS1P54277 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.54□□□□□ -1.2
PMS1P54277 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
PMS1P54277 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
PMS1P54277 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.54□□□□□ -1.2
PMS1P54277 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.54□□□□□ -1.2
PMS1P54277 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.54□□□□□ -1.2
PMS1P54277 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PMS1P54277 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PMS1P54277 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PMS1P54277 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PMS1P54277 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.54□□□□□ -1.2
PMS1P54277 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PMS1P54277 RNA5SP53-201ENST00000391299 120 ntBASIC7.54□□□□□ -1.2
PMS1P54277 Z86062.1-201ENST00000406773 777 ntBASIC7.54□□□□□ -1.2
PMS1P54277 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
PMS1P54277 RN7SKP137-201ENST00000411074 307 ntBASIC7.54□□□□□ -1.2
PMS1P54277 RPL12P10-201ENST00000413498 498 ntBASIC7.54□□□□□ -1.2
PMS1P54277 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC7.54□□□□□ -1.2
PMS1P54277 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC7.54□□□□□ -1.2
PMS1P54277 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.54□□□□□ -1.2
PMS1P54277 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PMS1P54277 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC7.54□□□□□ -1.2
PMS1P54277 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
PMS1P54277 AC007365.2-201ENST00000428806 458 ntBASIC7.54□□□□□ -1.2
PMS1P54277 TXNL1P1-201ENST00000429528 554 ntBASIC7.54□□□□□ -1.2
PMS1P54277 FECHP1-201ENST00000431896 1214 ntBASIC7.54□□□□□ -1.2
PMS1P54277 USP9YP24-201ENST00000434374 697 ntBASIC7.54□□□□□ -1.2
PMS1P54277 CR391992.1-201ENST00000438601 394 ntBASIC7.54□□□□□ -1.2
PMS1P54277 USP9YP17-201ENST00000444617 696 ntBASIC7.54□□□□□ -1.2
PMS1P54277 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.54□□□□□ -1.2
PMS1P54277 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC7.54□□□□□ -1.2
PMS1P54277 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC7.54□□□□□ -1.2
PMS1P54277 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC7.54□□□□□ -1.2
PMS1P54277 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PMS1P54277 RN7SL561P-201ENST00000488553 281 ntBASIC7.54□□□□□ -1.2
PMS1P54277 OR5H3P-201ENST00000502817 919 ntBASIC7.54□□□□□ -1.2
PMS1P54277 AC093770.1-201ENST00000511559 571 ntBASIC7.54□□□□□ -1.2
PMS1P54277 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
PMS1P54277 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PMS1P54277 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.54□□□□□ -1.2
PMS1P54277 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PMS1P54277 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC7.54□□□□□ -1.2
PMS1P54277 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.54□□□□□ -1.2
PMS1P54277 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC7.54□□□□□ -1.2
PMS1P54277 DHFRP1-201ENST00000579682 559 ntBASIC7.54□□□□□ -1.2
PMS1P54277 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC7.54□□□□□ -1.2
PMS1P54277 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC7.54□□□□□ -1.2
PMS1P54277 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.54□□□□□ -1.2
PMS1P54277 AC011447.2-201ENST00000592921 283 ntBASIC7.54□□□□□ -1.2
PMS1P54277 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.54□□□□□ -1.2
PMS1P54277 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC7.54□□□□□ -1.2
PMS1P54277 AP002802.2-201ENST00000605877 235 ntBASIC7.54□□□□□ -1.2
PMS1P54277 OR1N1-202ENST00000619659 939 ntBASIC7.54□□□□□ -1.2
PMS1P54277 SNORA16A-202ENST00000628458 135 ntBASIC7.54□□□□□ -1.2
PMS1P54277 AC026108.1-201ENST00000635444 547 ntBASIC7.54□□□□□ -1.2
PMS1P54277 AC006927.2-201ENST00000639256 389 ntBASIC7.54□□□□□ -1.2
PMS1P54277 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
PMS1P54277 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.54□□□□□ -1.2
PMS1P54277 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.54□□□□□ -1.2
PMS1P54277 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PMS1P54277 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PMS1P54277 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PMS1P54277 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
PMS1P54277 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.54□□□□□ -1.2
PMS1P54277 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
PMS1P54277 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PMS1P54277 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
PMS1P54277 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PMS1P54277 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PMS1P54277 AL359694.2-201ENST00000567753 1615 ntBASIC7.53□□□□□ -1.2
PMS1P54277 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
PMS1P54277 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.53□□□□□ -1.2
PMS1P54277 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.53□□□□□ -1.2
PMS1P54277 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.53□□□□□ -1.2
PMS1P54277 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PMS1P54277 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
PMS1P54277 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
PMS1P54277 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
PMS1P54277 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
PMS1P54277 MIR365B-201ENST00000362317 111 ntBASIC7.53□□□□□ -1.2
PMS1P54277 RNU6-1331P-201ENST00000363658 106 ntBASIC7.53□□□□□ -1.2
PMS1P54277 SNORA70.3-201ENST00000365075 132 ntBASIC7.53□□□□□ -1.2
PMS1P54277 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
PMS1P54277 SNORA79B-201ENST00000410557 148 ntBASIC7.53□□□□□ -1.2
PMS1P54277 NRIR-202ENST00000414795 506 ntTSL 3 BASIC7.53□□□□□ -1.2
PMS1P54277 HSFY4P-201ENST00000415994 1181 ntBASIC7.53□□□□□ -1.2
PMS1P54277 MTCO3P4-201ENST00000419236 787 ntBASIC7.53□□□□□ -1.2
PMS1P54277 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC7.53□□□□□ -1.2
PMS1P54277 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.53□□□□□ -1.2
PMS1P54277 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.53□□□□□ -1.2
PMS1P54277 AC114402.2-201ENST00000432760 643 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms