Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7□□□□□ -1.29
COPB1P53618 GUCY1B2-204ENST00000531898 1979 ntBASIC7□□□□□ -1.29
COPB1P53618 SHQ1P1-201ENST00000437111 1544 ntBASIC7□□□□□ -1.29
COPB1P53618 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COPB1P53618 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7□□□□□ -1.29
COPB1P53618 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
COPB1P53618 MTND5P12-201ENST00000502851 1449 ntBASIC7□□□□□ -1.29
COPB1P53618 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COPB1P53618 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC7□□□□□ -1.29
COPB1P53618 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7□□□□□ -1.29
COPB1P53618 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.99□□□□□ -1.29
COPB1P53618 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.99□□□□□ -1.29
COPB1P53618 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
COPB1P53618 AC092692.1-201ENST00000623625 2595 ntBASIC6.99□□□□□ -1.29
COPB1P53618 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COPB1P53618 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
COPB1P53618 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
COPB1P53618 OR7A2P-201ENST00000304105 930 ntBASIC6.99□□□□□ -1.29
COPB1P53618 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.99□□□□□ -1.29
COPB1P53618 SNORA70.9-201ENST00000384370 135 ntBASIC6.99□□□□□ -1.29
COPB1P53618 AL034417.1-201ENST00000399343 800 ntBASIC6.99□□□□□ -1.29
COPB1P53618 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.99□□□□□ -1.29
COPB1P53618 AC007562.1-201ENST00000421819 517 ntBASIC6.99□□□□□ -1.29
COPB1P53618 TRIM60P13-201ENST00000432350 1283 ntBASIC6.99□□□□□ -1.29
COPB1P53618 MED28P4-201ENST00000433137 572 ntBASIC6.99□□□□□ -1.29
COPB1P53618 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.99□□□□□ -1.29
COPB1P53618 E2F6P3-201ENST00000441743 743 ntBASIC6.99□□□□□ -1.29
COPB1P53618 AC023274.2-201ENST00000445264 521 ntBASIC6.99□□□□□ -1.29
COPB1P53618 CEACAMP11-201ENST00000455211 583 ntBASIC6.99□□□□□ -1.29
COPB1P53618 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.99□□□□□ -1.29
COPB1P53618 SLC25A51P1-201ENST00000468432 871 ntBASIC6.99□□□□□ -1.29
COPB1P53618 HESX1-202ENST00000473921 757 ntTSL 5 BASIC6.99□□□□□ -1.29
COPB1P53618 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.99□□□□□ -1.29
COPB1P53618 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.99□□□□□ -1.29
COPB1P53618 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.99□□□□□ -1.29
COPB1P53618 COX6B1P4-201ENST00000519826 484 ntBASIC6.99□□□□□ -1.29
COPB1P53618 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.99□□□□□ -1.29
COPB1P53618 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.99□□□□□ -1.29
COPB1P53618 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.99□□□□□ -1.29
COPB1P53618 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.99□□□□□ -1.29
COPB1P53618 AC009120.3-201ENST00000563335 499 ntBASIC6.99□□□□□ -1.29
COPB1P53618 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC6.99□□□□□ -1.29
COPB1P53618 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.99□□□□□ -1.29
COPB1P53618 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.99□□□□□ -1.29
COPB1P53618 RPL29P33-201ENST00000587474 316 ntBASIC6.99□□□□□ -1.29
COPB1P53618 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.99□□□□□ -1.29
COPB1P53618 AC107905.1-201ENST00000616204 426 ntBASIC6.99□□□□□ -1.29
COPB1P53618 MIR6085-201ENST00000618314 110 ntBASIC6.99□□□□□ -1.29
COPB1P53618 MIR7854-201ENST00000620068 65 ntBASIC6.99□□□□□ -1.29
COPB1P53618 AC005514.1-201ENST00000623521 208 ntBASIC6.99□□□□□ -1.29
COPB1P53618 AL162377.2-201ENST00000624532 337 ntBASIC6.99□□□□□ -1.29
COPB1P53618 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
COPB1P53618 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COPB1P53618 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COPB1P53618 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COPB1P53618 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
COPB1P53618 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COPB1P53618 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
COPB1P53618 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.99□□□□□ -1.29
COPB1P53618 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COPB1P53618 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
COPB1P53618 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.99□□□□□ -1.29
COPB1P53618 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.99□□□□□ -1.29
COPB1P53618 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COPB1P53618 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
COPB1P53618 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COPB1P53618 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COPB1P53618 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COPB1P53618 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
COPB1P53618 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COPB1P53618 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COPB1P53618 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.98□□□□□ -1.29
COPB1P53618 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COPB1P53618 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
COPB1P53618 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.98□□□□□ -1.29
COPB1P53618 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COPB1P53618 SNORD35A-201ENST00000363389 86 ntBASIC6.98□□□□□ -1.29
COPB1P53618 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.98□□□□□ -1.29
COPB1P53618 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
COPB1P53618 AC245036.1-201ENST00000391727 309 ntBASIC6.98□□□□□ -1.29
COPB1P53618 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.98□□□□□ -1.29
COPB1P53618 AC013470.3-201ENST00000420252 1194 ntBASIC6.98□□□□□ -1.29
COPB1P53618 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.98□□□□□ -1.29
COPB1P53618 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.98□□□□□ -1.29
COPB1P53618 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.98□□□□□ -1.29
COPB1P53618 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.98□□□□□ -1.29
COPB1P53618 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.98□□□□□ -1.29
COPB1P53618 AL356121.1-201ENST00000442911 156 ntBASIC6.98□□□□□ -1.29
COPB1P53618 VN1R96P-201ENST00000446052 858 ntBASIC6.98□□□□□ -1.29
COPB1P53618 AC009244.1-201ENST00000450566 258 ntBASIC6.98□□□□□ -1.29
COPB1P53618 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COPB1P53618 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.98□□□□□ -1.29
COPB1P53618 RN7SL70P-201ENST00000478322 302 ntBASIC6.98□□□□□ -1.29
COPB1P53618 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.98□□□□□ -1.29
COPB1P53618 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.98□□□□□ -1.29
COPB1P53618 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.98□□□□□ -1.29
COPB1P53618 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.98□□□□□ -1.29
COPB1P53618 AC078878.1-201ENST00000539832 958 ntBASIC6.98□□□□□ -1.29
COPB1P53618 AC005519.1-201ENST00000554490 601 ntBASIC6.98□□□□□ -1.29
COPB1P53618 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms