Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 RN7SKP161-201ENST00000411110 305 ntBASIC7.75□□□□□ -1.17
TM4SF1P30408 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.75□□□□□ -1.17
TM4SF1P30408 AL713922.1-201ENST00000416477 747 ntBASIC7.75□□□□□ -1.17
TM4SF1P30408 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.75□□□□□ -1.17
TM4SF1P30408 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.75□□□□□ -1.17
TM4SF1P30408 ZNF619P1-201ENST00000446539 752 ntBASIC7.75□□□□□ -1.17
TM4SF1P30408 AL445466.1-201ENST00000448432 357 ntBASIC7.75□□□□□ -1.17
TM4SF1P30408 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.75□□□□□ -1.17
TM4SF1P30408 RN7SL269P-201ENST00000467795 305 ntBASIC7.75□□□□□ -1.17
TM4SF1P30408 RPSAP37-201ENST00000470913 821 ntBASIC7.75□□□□□ -1.17
TM4SF1P30408 COX6B1P2-201ENST00000489624 230 ntBASIC7.75□□□□□ -1.17
TM4SF1P30408 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.75□□□□□ -1.17
TM4SF1P30408 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.75□□□□□ -1.17
TM4SF1P30408 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
TM4SF1P30408 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.75□□□□□ -1.17
TM4SF1P30408 AL356801.1-201ENST00000559320 294 ntBASIC7.75□□□□□ -1.17
TM4SF1P30408 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC7.75□□□□□ -1.17
TM4SF1P30408 AC090651.1-201ENST00000567865 634 ntBASIC7.75□□□□□ -1.17
TM4SF1P30408 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TM4SF1P30408 AC008536.1-201ENST00000602872 669 ntBASIC7.75□□□□□ -1.17
TM4SF1P30408 AL953862.2-201ENST00000603089 820 ntBASIC7.75□□□□□ -1.17
TM4SF1P30408 AL645933.2-201ENST00000606743 1207 ntBASIC7.75□□□□□ -1.17
TM4SF1P30408 AL021707.7-201ENST00000607991 416 ntBASIC7.75□□□□□ -1.17
TM4SF1P30408 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TM4SF1P30408 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.75□□□□□ -1.17
TM4SF1P30408 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
TM4SF1P30408 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TM4SF1P30408 MTND5P12-201ENST00000502851 1449 ntBASIC7.75□□□□□ -1.17
TM4SF1P30408 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
TM4SF1P30408 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
TM4SF1P30408 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TM4SF1P30408 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.75□□□□□ -1.17
TM4SF1P30408 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TM4SF1P30408 Z83820.1-201ENST00000456978 1499 ntBASIC7.75□□□□□ -1.17
TM4SF1P30408 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.74□□□□□ -1.17
TM4SF1P30408 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TM4SF1P30408 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
TM4SF1P30408 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TM4SF1P30408 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TM4SF1P30408 WDR95P-201ENST00000425638 1542 ntBASIC7.74□□□□□ -1.17
TM4SF1P30408 AC053481.2-202ENST00000582394 1500 ntBASIC7.74□□□□□ -1.17
TM4SF1P30408 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.74□□□□□ -1.17
TM4SF1P30408 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
TM4SF1P30408 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
TM4SF1P30408 OR9K1P-201ENST00000326513 941 ntBASIC7.74□□□□□ -1.17
TM4SF1P30408 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.74□□□□□ -1.17
TM4SF1P30408 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
TM4SF1P30408 MIR105-2-201ENST00000385083 81 ntBASIC7.74□□□□□ -1.17
TM4SF1P30408 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC7.74□□□□□ -1.17
TM4SF1P30408 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.74□□□□□ -1.17
TM4SF1P30408 GAPDHP23-201ENST00000444823 993 ntBASIC7.74□□□□□ -1.17
TM4SF1P30408 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.74□□□□□ -1.17
TM4SF1P30408 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.74□□□□□ -1.17
TM4SF1P30408 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.74□□□□□ -1.17
TM4SF1P30408 EIF3LP3-201ENST00000495197 822 ntBASIC7.74□□□□□ -1.17
TM4SF1P30408 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
TM4SF1P30408 IGKV2-18-201ENST00000522607 343 ntBASIC7.74□□□□□ -1.17
TM4SF1P30408 WBP1LP3-201ENST00000523033 208 ntBASIC7.74□□□□□ -1.17
TM4SF1P30408 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.74□□□□□ -1.17
TM4SF1P30408 PCNAP4-201ENST00000532690 730 ntBASIC7.74□□□□□ -1.17
TM4SF1P30408 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.74□□□□□ -1.17
TM4SF1P30408 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.74□□□□□ -1.17
TM4SF1P30408 MIR4776-2-201ENST00000580204 80 ntBASIC7.74□□□□□ -1.17
TM4SF1P30408 AC233702.7-202ENST00000582941 211 ntBASIC7.74□□□□□ -1.17
TM4SF1P30408 TSHZ2-205ENST00000626626 670 ntBASIC7.74□□□□□ -1.17
TM4SF1P30408 MIR193BHG-214ENST00000641765 509 ntBASIC7.74□□□□□ -1.17
TM4SF1P30408 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC7.74□□□□□ -1.17
TM4SF1P30408 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC7.74□□□□□ -1.17
TM4SF1P30408 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.74□□□□□ -1.17
TM4SF1P30408 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.74□□□□□ -1.17
TM4SF1P30408 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
TM4SF1P30408 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TM4SF1P30408 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.74□□□□□ -1.17
TM4SF1P30408 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
TM4SF1P30408 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
TM4SF1P30408 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.74□□□□□ -1.17
TM4SF1P30408 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
TM4SF1P30408 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
TM4SF1P30408 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TM4SF1P30408 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.74□□□□□ -1.17
TM4SF1P30408 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.74□□□□□ -1.17
TM4SF1P30408 AC027088.4-201ENST00000611559 1947 ntBASIC7.74□□□□□ -1.17
TM4SF1P30408 MROH3P-201ENST00000435735 2676 ntBASIC7.74□□□□□ -1.17
TM4SF1P30408 AC018765.1-201ENST00000623357 3446 ntBASIC7.74□□□□□ -1.17
TM4SF1P30408 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.74□□□□□ -1.17
TM4SF1P30408 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TM4SF1P30408 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
TM4SF1P30408 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TM4SF1P30408 NEPNP-201ENST00000404786 1371 ntBASIC7.73□□□□□ -1.17
TM4SF1P30408 NR1H5P-201ENST00000452683 1377 ntBASIC7.73□□□□□ -1.17
TM4SF1P30408 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TM4SF1P30408 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TM4SF1P30408 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
TM4SF1P30408 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TM4SF1P30408 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.73□□□□□ -1.17
TM4SF1P30408 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.73□□□□□ -1.17
TM4SF1P30408 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.73□□□□□ -1.17
TM4SF1P30408 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TM4SF1P30408 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
TM4SF1P30408 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms