Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC8.75□□□□□ -1.01
RXRBP28702 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RXRBP28702 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RXRBP28702 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
RXRBP28702 AC008937.3-201ENST00000606813 1700 ntBASIC8.74□□□□□ -1.01
RXRBP28702 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
RXRBP28702 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
RXRBP28702 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
RXRBP28702 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
RXRBP28702 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RXRBP28702 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC8.74□□□□□ -1.01
RXRBP28702 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RXRBP28702 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RXRBP28702 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC8.74□□□□□ -1.01
RXRBP28702 OR1F12-201ENST00000402365 945 ntBASIC8.74□□□□□ -1.01
RXRBP28702 SNORA11-201ENST00000408789 128 ntBASIC8.74□□□□□ -1.01
RXRBP28702 RPL37P18-201ENST00000411602 243 ntBASIC8.74□□□□□ -1.01
RXRBP28702 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC8.74□□□□□ -1.01
RXRBP28702 CR848007.2-201ENST00000424918 787 ntBASIC8.74□□□□□ -1.01
RXRBP28702 RPP40P1-201ENST00000426762 456 ntBASIC8.74□□□□□ -1.01
RXRBP28702 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC8.74□□□□□ -1.01
RXRBP28702 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC8.74□□□□□ -1.01
RXRBP28702 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC8.74□□□□□ -1.01
RXRBP28702 AL445665.1-202ENST00000452436 324 ntBASIC8.74□□□□□ -1.01
RXRBP28702 CLIC4P1-201ENST00000453177 535 ntBASIC8.74□□□□□ -1.01
RXRBP28702 PTMAP1-205ENST00000455552 325 ntBASIC8.74□□□□□ -1.01
RXRBP28702 UCK2-205ENST00000469256 753 ntTSL 3 BASIC8.74□□□□□ -1.01
RXRBP28702 AC025768.1-201ENST00000510057 267 ntBASIC8.74□□□□□ -1.01
RXRBP28702 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC8.74□□□□□ -1.01
RXRBP28702 TPRX1P1-201ENST00000557620 319 ntBASIC8.74□□□□□ -1.01
RXRBP28702 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC8.74□□□□□ -1.01
RXRBP28702 AC010323.2-201ENST00000596405 594 ntBASIC8.74□□□□□ -1.01
RXRBP28702 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC8.74□□□□□ -1.01
RXRBP28702 AC120053.1-201ENST00000607706 736 ntBASIC8.74□□□□□ -1.01
RXRBP28702 AC245008.1-201ENST00000608123 476 ntBASIC8.74□□□□□ -1.01
RXRBP28702 AC245014.3-201ENST00000618589 347 ntBASIC8.74□□□□□ -1.01
RXRBP28702 AC004943.1-203ENST00000624370 1074 ntBASIC8.74□□□□□ -1.01
RXRBP28702 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC8.74□□□□□ -1.01
RXRBP28702 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RXRBP28702 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RXRBP28702 HSPA8P11-201ENST00000508840 1898 ntBASIC8.74□□□□□ -1.01
RXRBP28702 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RXRBP28702 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RXRBP28702 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
RXRBP28702 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC8.73□□□□□ -1.01
RXRBP28702 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RXRBP28702 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
RXRBP28702 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RXRBP28702 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RXRBP28702 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
RXRBP28702 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC8.73□□□□□ -1.01
RXRBP28702 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RXRBP28702 AL390862.1-201ENST00000635467 1469 ntBASIC8.73□□□□□ -1.01
RXRBP28702 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RXRBP28702 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RXRBP28702 UBE2V1P15-201ENST00000407776 448 ntBASIC8.73□□□□□ -1.01
RXRBP28702 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC8.73□□□□□ -1.01
RXRBP28702 AL121916.1-201ENST00000429405 308 ntBASIC8.73□□□□□ -1.01
RXRBP28702 MTND1P34-201ENST00000438556 671 ntBASIC8.73□□□□□ -1.01
RXRBP28702 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC8.73□□□□□ -1.01
RXRBP28702 RAD1P2-201ENST00000446414 663 ntBASIC8.73□□□□□ -1.01
RXRBP28702 AC108751.3-201ENST00000461814 1020 ntBASIC8.73□□□□□ -1.01
RXRBP28702 DAP3-209ENST00000465375 729 ntTSL 2 BASIC8.73□□□□□ -1.01
RXRBP28702 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RXRBP28702 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.73□□□□□ -1.01
RXRBP28702 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC8.73□□□□□ -1.01
RXRBP28702 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC8.73□□□□□ -1.01
RXRBP28702 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC8.73□□□□□ -1.01
RXRBP28702 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC8.73□□□□□ -1.01
RXRBP28702 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC8.73□□□□□ -1.01
RXRBP28702 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC8.73□□□□□ -1.01
RXRBP28702 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC8.73□□□□□ -1.01
RXRBP28702 AL356608.1-201ENST00000610034 820 ntBASIC8.73□□□□□ -1.01
RXRBP28702 MIR7155-201ENST00000615925 56 ntBASIC8.73□□□□□ -1.01
RXRBP28702 AC010809.3-201ENST00000621310 641 ntBASIC8.73□□□□□ -1.01
RXRBP28702 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC8.73□□□□□ -1.01
RXRBP28702 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC8.73□□□□□ -1.01
RXRBP28702 CASC19-208ENST00000641056 1292 ntBASIC8.73□□□□□ -1.01
RXRBP28702 CASC19-227ENST00000641411 1285 ntBASIC8.73□□□□□ -1.01
RXRBP28702 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC8.73□□□□□ -1.01
RXRBP28702 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RXRBP28702 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RXRBP28702 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
RXRBP28702 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RXRBP28702 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RXRBP28702 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC8.73□□□□□ -1.01
RXRBP28702 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RXRBP28702 AL590004.4-201ENST00000566733 7060 ntBASIC8.73□□□□□ -1.01
RXRBP28702 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC8.73□□□□□ -1.01
RXRBP28702 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
RXRBP28702 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC8.73□□□□□ -1.01
RXRBP28702 DDX43P2-201ENST00000604753 1354 ntBASIC8.73□□□□□ -1.01
RXRBP28702 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
RXRBP28702 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RXRBP28702 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RXRBP28702 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC8.72□□□□□ -1.01
RXRBP28702 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RXRBP28702 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
RXRBP28702 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
RXRBP28702 RNA5SP110-201ENST00000362638 115 ntBASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms