Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CD40P25942 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CD40P25942 DDX18P6-201ENST00000450119 1997 ntBASIC6.26□□□□□ -1.41
CD40P25942 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
CD40P25942 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD40P25942 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CD40P25942 OR5H2-201ENST00000355273 945 ntBASIC6.26□□□□□ -1.41
CD40P25942 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CD40P25942 RNU4-92P-201ENST00000363783 136 ntBASIC6.26□□□□□ -1.41
CD40P25942 RNA5SP27-201ENST00000363839 119 ntBASIC6.26□□□□□ -1.41
CD40P25942 RNU12-2P-201ENST00000364789 156 ntBASIC6.26□□□□□ -1.41
CD40P25942 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CD40P25942 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CD40P25942 AL121977.1-201ENST00000401636 979 ntBASIC6.26□□□□□ -1.41
CD40P25942 DNAJC19P6-201ENST00000401853 280 ntBASIC6.26□□□□□ -1.41
CD40P25942 HMGB3P31-201ENST00000413333 595 ntBASIC6.26□□□□□ -1.41
CD40P25942 RPS7P9-201ENST00000414704 586 ntBASIC6.26□□□□□ -1.41
CD40P25942 AL008987.1-201ENST00000415528 237 ntBASIC6.26□□□□□ -1.41
CD40P25942 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.26□□□□□ -1.41
CD40P25942 HIGD1AP12-201ENST00000427832 281 ntBASIC6.26□□□□□ -1.41
CD40P25942 Z68868.1-201ENST00000429048 544 ntBASIC6.26□□□□□ -1.41
CD40P25942 GAPDHP34-201ENST00000432112 823 ntBASIC6.26□□□□□ -1.41
CD40P25942 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CD40P25942 LSM3P3-201ENST00000436601 306 ntBASIC6.26□□□□□ -1.41
CD40P25942 EMC3-AS1-205ENST00000438698 534 ntBASIC6.26□□□□□ -1.41
CD40P25942 DNAJA1P5-201ENST00000440278 943 ntBASIC6.26□□□□□ -1.41
CD40P25942 AC009237.4-201ENST00000441078 238 ntBASIC6.26□□□□□ -1.41
CD40P25942 AC010240.2-201ENST00000445363 1205 ntBASIC6.26□□□□□ -1.41
CD40P25942 OTX2P1-201ENST00000450956 354 ntBASIC6.26□□□□□ -1.41
CD40P25942 TREML3P-201ENST00000457327 501 ntBASIC6.26□□□□□ -1.41
CD40P25942 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.26□□□□□ -1.41
CD40P25942 PABPC1P10-201ENST00000464731 381 ntBASIC6.26□□□□□ -1.41
CD40P25942 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC6.26□□□□□ -1.41
CD40P25942 RPL23P10-201ENST00000468780 412 ntBASIC6.26□□□□□ -1.41
CD40P25942 OR7E22P-201ENST00000478335 1035 ntBASIC6.26□□□□□ -1.41
CD40P25942 BET1P1-201ENST00000482276 359 ntBASIC6.26□□□□□ -1.41
CD40P25942 RN7SL306P-201ENST00000492941 296 ntBASIC6.26□□□□□ -1.41
CD40P25942 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.26□□□□□ -1.41
CD40P25942 AC034244.1-201ENST00000507687 207 ntBASIC6.26□□□□□ -1.41
CD40P25942 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.26□□□□□ -1.41
CD40P25942 RNA5SP518-201ENST00000515957 119 ntBASIC6.26□□□□□ -1.41
CD40P25942 SCARNA18.2-201ENST00000516882 84 ntBASIC6.26□□□□□ -1.41
CD40P25942 RPL10P18-201ENST00000519384 309 ntBASIC6.26□□□□□ -1.41
CD40P25942 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC6.26□□□□□ -1.41
CD40P25942 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.26□□□□□ -1.41
CD40P25942 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC6.26□□□□□ -1.41
CD40P25942 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.26□□□□□ -1.41
CD40P25942 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC6.26□□□□□ -1.41
CD40P25942 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CD40P25942 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CD40P25942 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.26□□□□□ -1.41
CD40P25942 AL031846.1-201ENST00000560933 314 ntBASIC6.26□□□□□ -1.41
CD40P25942 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.26□□□□□ -1.41
CD40P25942 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CD40P25942 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.26□□□□□ -1.41
CD40P25942 MIR744-201ENST00000578242 98 ntBASIC6.26□□□□□ -1.41
CD40P25942 RN7SL131P-201ENST00000579043 256 ntBASIC6.26□□□□□ -1.41
CD40P25942 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC6.26□□□□□ -1.41
CD40P25942 CR382285.1-202ENST00000604687 547 ntBASIC6.26□□□□□ -1.41
CD40P25942 AC011374.2-201ENST00000607135 526 ntBASIC6.26□□□□□ -1.41
CD40P25942 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.26□□□□□ -1.41
CD40P25942 AL138478.1-201ENST00000612252 832 ntBASIC6.26□□□□□ -1.41
CD40P25942 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.26□□□□□ -1.41
CD40P25942 AL139407.1-201ENST00000613826 1175 ntBASIC6.26□□□□□ -1.41
CD40P25942 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.26□□□□□ -1.41
CD40P25942 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.26□□□□□ -1.41
CD40P25942 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.26□□□□□ -1.41
CD40P25942 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.26□□□□□ -1.41
CD40P25942 UG0898H09-202ENST00000623646 7040 ntBASIC6.26□□□□□ -1.41
CD40P25942 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.26□□□□□ -1.41
CD40P25942 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD40P25942 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD40P25942 AC093844.1-201ENST00000514910 1361 ntBASIC6.26□□□□□ -1.41
CD40P25942 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD40P25942 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CD40P25942 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CD40P25942 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.26□□□□□ -1.41
CD40P25942 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC6.26□□□□□ -1.41
CD40P25942 PHF2P2-202ENST00000444553 2865 ntBASIC6.26□□□□□ -1.41
CD40P25942 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC6.26□□□□□ -1.41
CD40P25942 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD40P25942 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD40P25942 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC6.26□□□□□ -1.41
CD40P25942 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD40P25942 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CD40P25942 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CD40P25942 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
CD40P25942 EPS15P1-202ENST00000459691 2071 ntBASIC6.26□□□□□ -1.41
CD40P25942 AC027279.4-201ENST00000624371 2072 ntBASIC6.26□□□□□ -1.41
CD40P25942 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CD40P25942 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD40P25942 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CD40P25942 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD40P25942 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CD40P25942 AC010886.1-201ENST00000437380 2869 ntBASIC6.25□□□□□ -1.41
CD40P25942 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD40P25942 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CD40P25942 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD40P25942 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CD40P25942 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms