Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL157827.1-201ENST00000447622 132 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 MTCO3P35-201ENST00000485582 781 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 AL591122.1-201ENST00000487348 492 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 RPS27AP16-201ENST00000492222 470 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 RN7SL350P-201ENST00000492591 299 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC8.28□□□□□ -1.08
ERCC3P19447 NACAP5-201ENST00000509863 636 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC8.28□□□□□ -1.08
ERCC3P19447 UBTFL10-201ENST00000528532 562 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 LRRC6P1-201ENST00000532188 885 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC8.28□□□□□ -1.08
ERCC3P19447 AC069240.2-201ENST00000550242 609 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC8.28□□□□□ -1.08
ERCC3P19447 AC010287.1-201ENST00000566916 357 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC8.28□□□□□ -1.08
ERCC3P19447 AC008751.2-201ENST00000597885 980 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC8.28□□□□□ -1.08
ERCC3P19447 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 PART1_2.1-201ENST00000612397 250 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC8.28□□□□□ -1.08
ERCC3P19447 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC8.28□□□□□ -1.08
ERCC3P19447 AC009039.2-201ENST00000624524 529 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 RPSAP68-201ENST00000625020 438 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 AC017104.5-201ENST00000637647 639 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC8.28□□□□□ -1.08
ERCC3P19447 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
ERCC3P19447 NEK2P4-201ENST00000425793 1329 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 AC092451.3-201ENST00000625067 1343 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 AC007342.7-201ENST00000624610 2337 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
ERCC3P19447 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
ERCC3P19447 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ERCC3P19447 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ERCC3P19447 AL133320.1-201ENST00000621423 2352 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC8.27□□□□□ -1.09
ERCC3P19447 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
ERCC3P19447 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ERCC3P19447 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ERCC3P19447 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
ERCC3P19447 RNU5B-1-201ENST00000363286 116 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ERCC3P19447 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.09
ERCC3P19447 LIPT1P1-201ENST00000415870 1186 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 VDAC1P10-201ENST00000416715 891 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC8.27□□□□□ -1.09
ERCC3P19447 RPL18AP14-201ENST00000417685 526 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC8.27□□□□□ -1.09
ERCC3P19447 MYO5BP3-201ENST00000431872 1279 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 AL138787.1-202ENST00000437804 898 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 KF459542.1-201ENST00000450908 553 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 RPL31P11-202ENST00000454082 372 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 AC004890.1-201ENST00000461005 181 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 AC040975.1-201ENST00000472104 316 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC8.27□□□□□ -1.09
ERCC3P19447 RN7SL741P-201ENST00000482473 289 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC8.27□□□□□ -1.09
ERCC3P19447 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ERCC3P19447 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC8.27□□□□□ -1.09
ERCC3P19447 AC021106.1-201ENST00000509020 1058 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 UGT2A3P7-201ENST00000510485 734 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 AC119751.5-201ENST00000514077 770 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 RN7SKP233-201ENST00000517005 110 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC8.27□□□□□ -1.09
ERCC3P19447 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
ERCC3P19447 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC8.27□□□□□ -1.09
ERCC3P19447 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC8.27□□□□□ -1.09
ERCC3P19447 EEF1B2P1-201ENST00000567221 672 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC8.27□□□□□ -1.09
ERCC3P19447 MIR4789-201ENST00000577469 82 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 AC068020.1-201ENST00000594215 661 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC8.27□□□□□ -1.09
ERCC3P19447 AC130352.1-201ENST00000602979 661 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC8.27□□□□□ -1.09
ERCC3P19447 MIR6885-201ENST00000612241 66 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 AL161420.1-201ENST00000619393 264 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 AC008626.2-201ENST00000624425 248 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
ERCC3P19447 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ERCC3P19447 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ERCC3P19447 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC8.27□□□□□ -1.09
ERCC3P19447 AL117339.4-201ENST00000608335 7063 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
ERCC3P19447 AC099786.3-201ENST00000565735 1410 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 TRIM64EP-201ENST00000531233 1307 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 MFSD8-213ENST00000641134 1327 ntBASIC8.27□□□□□ -1.09
ERCC3P19447 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ERCC3P19447 ICE2P1-201ENST00000512800 1849 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms