Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.93□□□□□ -1.3
COL6A2P12110 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.93□□□□□ -1.3
COL6A2P12110 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.93□□□□□ -1.3
COL6A2P12110 NDUFA5P9-201ENST00000472609 340 ntBASIC6.93□□□□□ -1.3
COL6A2P12110 AC008410.1-201ENST00000483777 339 ntBASIC6.93□□□□□ -1.3
COL6A2P12110 AK4P6-201ENST00000505168 528 ntBASIC6.93□□□□□ -1.3
COL6A2P12110 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.93□□□□□ -1.3
COL6A2P12110 CASP1P2-201ENST00000526830 1258 ntBASIC6.93□□□□□ -1.3
COL6A2P12110 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.93□□□□□ -1.3
COL6A2P12110 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL6A2P12110 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC6.93□□□□□ -1.3
COL6A2P12110 AC010735.1-201ENST00000567305 1026 ntBASIC6.93□□□□□ -1.3
COL6A2P12110 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.93□□□□□ -1.3
COL6A2P12110 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC6.93□□□□□ -1.3
COL6A2P12110 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.93□□□□□ -1.3
COL6A2P12110 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.93□□□□□ -1.3
COL6A2P12110 MTCO3P22-201ENST00000603219 784 ntBASIC6.93□□□□□ -1.3
COL6A2P12110 RN7SL778P-201ENST00000607160 297 ntBASIC6.93□□□□□ -1.3
COL6A2P12110 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL6A2P12110 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC6.93□□□□□ -1.3
COL6A2P12110 AC010320.5-201ENST00000619124 676 ntBASIC6.93□□□□□ -1.3
COL6A2P12110 PART1_3.1-201ENST00000619680 131 ntBASIC6.93□□□□□ -1.3
COL6A2P12110 AC120057.5-201ENST00000623840 154 ntBASIC6.93□□□□□ -1.3
COL6A2P12110 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.93□□□□□ -1.3
COL6A2P12110 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.93□□□□□ -1.3
COL6A2P12110 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.93□□□□□ -1.3
COL6A2P12110 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.93□□□□□ -1.3
COL6A2P12110 AL355578.1-201ENST00000607405 1328 ntBASIC6.93□□□□□ -1.3
COL6A2P12110 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL6A2P12110 AP005139.1-201ENST00000580702 1647 ntBASIC6.93□□□□□ -1.3
COL6A2P12110 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COL6A2P12110 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL6A2P12110 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.93□□□□□ -1.3
COL6A2P12110 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.93□□□□□ -1.3
COL6A2P12110 OFD1P17-201ENST00000437639 3018 ntBASIC6.93□□□□□ -1.3
COL6A2P12110 PABPC1P8-201ENST00000452851 2086 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.92□□□□□ -1.3
COL6A2P12110 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.92□□□□□ -1.3
COL6A2P12110 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL6A2P12110 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL6A2P12110 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
COL6A2P12110 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL6A2P12110 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.92□□□□□ -1.3
COL6A2P12110 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL6A2P12110 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL6A2P12110 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
COL6A2P12110 U3.1-201ENST00000362500 215 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
COL6A2P12110 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.92□□□□□ -1.3
COL6A2P12110 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.92□□□□□ -1.3
COL6A2P12110 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL6A2P12110 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL6A2P12110 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.92□□□□□ -1.3
COL6A2P12110 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC6.92□□□□□ -1.3
COL6A2P12110 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL6A2P12110 TAS2R2P-201ENST00000421146 910 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 USP9YP11-201ENST00000427537 717 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.92□□□□□ -1.3
COL6A2P12110 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC6.92□□□□□ -1.3
COL6A2P12110 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.92□□□□□ -1.3
COL6A2P12110 FABP5P3-201ENST00000437960 408 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.92□□□□□ -1.3
COL6A2P12110 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL6A2P12110 AL161626.1-201ENST00000441480 490 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 AL139135.2-201ENST00000445040 433 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 CYCSP44-201ENST00000448560 313 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 HIST1H2APS6-201ENST00000448609 364 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.92□□□□□ -1.3
COL6A2P12110 PSMA6P2-201ENST00000457574 686 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.92□□□□□ -1.3
COL6A2P12110 RPL5P12-201ENST00000477071 851 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 MTCO3P35-201ENST00000485582 781 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.92□□□□□ -1.3
COL6A2P12110 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC6.92□□□□□ -1.3
COL6A2P12110 AC106774.2-201ENST00000510266 406 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 AC118465.1-201ENST00000513820 1271 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 MTND4LP31-201ENST00000514859 294 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 SCARNA6-201ENST00000515982 265 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.92□□□□□ -1.3
COL6A2P12110 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.92□□□□□ -1.3
COL6A2P12110 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.92□□□□□ -1.3
COL6A2P12110 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
COL6A2P12110 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.92□□□□□ -1.3
COL6A2P12110 OSBPL9P5-201ENST00000542581 171 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.92□□□□□ -1.3
COL6A2P12110 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.92□□□□□ -1.3
COL6A2P12110 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL6A2P12110 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.92□□□□□ -1.3
COL6A2P12110 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.92□□□□□ -1.3
COL6A2P12110 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.92□□□□□ -1.3
COL6A2P12110 AL031846.1-201ENST00000560933 314 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 AC027455.1-201ENST00000574104 594 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC6.92□□□□□ -1.3
COL6A2P12110 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC6.92□□□□□ -1.3
COL6A2P12110 SNX6P1-201ENST00000601728 1224 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 AC005034.4-201ENST00000603612 899 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 Z94722.1-201ENST00000604328 474 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.92□□□□□ -1.3
COL6A2P12110 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms