Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD28P10747 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD28P10747 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.02□□□□□ -1.61
CD28P10747 AL157702.1-201ENST00000398764 426 ntBASIC5.02□□□□□ -1.61
CD28P10747 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD28P10747 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD28P10747 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD28P10747 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.02□□□□□ -1.61
CD28P10747 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.02□□□□□ -1.61
CD28P10747 PMS2P9-201ENST00000441237 515 ntBASIC5.02□□□□□ -1.61
CD28P10747 AL645936.1-201ENST00000441979 518 ntBASIC5.02□□□□□ -1.61
CD28P10747 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.02□□□□□ -1.61
CD28P10747 RN7SL561P-201ENST00000488553 281 ntBASIC5.02□□□□□ -1.61
CD28P10747 AC063943.2-201ENST00000495697 534 ntBASIC5.02□□□□□ -1.61
CD28P10747 AC253576.1-201ENST00000511645 1156 ntBASIC5.02□□□□□ -1.61
CD28P10747 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.02□□□□□ -1.61
CD28P10747 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.02□□□□□ -1.61
CD28P10747 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CD28P10747 AC090115.2-201ENST00000548060 883 ntBASIC5.02□□□□□ -1.61
CD28P10747 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.02□□□□□ -1.61
CD28P10747 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.02□□□□□ -1.61
CD28P10747 TPRX1P1-201ENST00000557620 319 ntBASIC5.02□□□□□ -1.61
CD28P10747 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.02□□□□□ -1.61
CD28P10747 MIR5095-201ENST00000578844 88 ntBASIC5.02□□□□□ -1.61
CD28P10747 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.02□□□□□ -1.61
CD28P10747 PRELID3BP3-201ENST00000584963 545 ntBASIC5.02□□□□□ -1.61
CD28P10747 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.02□□□□□ -1.61
CD28P10747 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.02□□□□□ -1.61
CD28P10747 CYCSP1-201ENST00000604815 315 ntBASIC5.02□□□□□ -1.61
CD28P10747 AP001264.1-201ENST00000620602 703 ntBASIC5.02□□□□□ -1.61
CD28P10747 AC022400.9-201ENST00000623633 273 ntBASIC5.02□□□□□ -1.61
CD28P10747 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.02□□□□□ -1.61
CD28P10747 AC099654.11-201ENST00000638857 294 ntBASIC5.02□□□□□ -1.61
CD28P10747 AL596275.2-208ENST00000641192 594 ntBASIC5.02□□□□□ -1.61
CD28P10747 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD28P10747 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD28P10747 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD28P10747 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC5.02□□□□□ -1.61
CD28P10747 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD28P10747 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC5.02□□□□□ -1.61
CD28P10747 BRD7P6-201ENST00000431406 1860 ntBASIC5.02□□□□□ -1.61
CD28P10747 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD28P10747 MAPK10-344ENST00000641718 3746 ntBASIC5.02□□□□□ -1.61
CD28P10747 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.02□□□□□ -1.61
CD28P10747 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD28P10747 CAST-202ENST00000325674 3356 ntTSL 5 BASIC5.02□□□□□ -1.61
CD28P10747 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD28P10747 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD28P10747 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD28P10747 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD28P10747 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CD28P10747 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CD28P10747 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD28P10747 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD28P10747 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD28P10747 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD28P10747 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CD28P10747 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CD28P10747 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD28P10747 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.01□□□□□ -1.61
CD28P10747 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.01□□□□□ -1.61
CD28P10747 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.01□□□□□ -1.61
CD28P10747 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.01□□□□□ -1.61
CD28P10747 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.01□□□□□ -1.61
CD28P10747 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.01□□□□□ -1.61
CD28P10747 RN7SKP269-201ENST00000365545 319 ntBASIC5.01□□□□□ -1.61
CD28P10747 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.01□□□□□ -1.61
CD28P10747 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.01□□□□□ -1.61
CD28P10747 RPSAP65-201ENST00000429660 595 ntBASIC5.01□□□□□ -1.61
CD28P10747 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC5.01□□□□□ -1.61
CD28P10747 MED28P4-201ENST00000433137 572 ntBASIC5.01□□□□□ -1.61
CD28P10747 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.01□□□□□ -1.61
CD28P10747 AC010240.2-201ENST00000445363 1205 ntBASIC5.01□□□□□ -1.61
CD28P10747 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.01□□□□□ -1.61
CD28P10747 OR52I1-201ENST00000450052 1050 ntBASIC5.01□□□□□ -1.61
CD28P10747 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.01□□□□□ -1.61
CD28P10747 RPL23AP68-201ENST00000480924 445 ntBASIC5.01□□□□□ -1.61
CD28P10747 AC117395.1-201ENST00000487390 403 ntBASIC5.01□□□□□ -1.61
CD28P10747 RPL12P30-201ENST00000488389 499 ntBASIC5.01□□□□□ -1.61
CD28P10747 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.01□□□□□ -1.61
CD28P10747 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.01□□□□□ -1.61
CD28P10747 RN7SL475P-201ENST00000583379 298 ntBASIC5.01□□□□□ -1.61
CD28P10747 AL157899.1-201ENST00000604110 936 ntBASIC5.01□□□□□ -1.61
CD28P10747 AC079414.3-201ENST00000612986 1090 ntBASIC5.01□□□□□ -1.61
CD28P10747 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.01□□□□□ -1.61
CD28P10747 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD28P10747 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CD28P10747 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
CD28P10747 CASC19-228ENST00000641414 1684 ntBASIC5.01□□□□□ -1.61
CD28P10747 QRSL1P1-201ENST00000400977 1540 ntBASIC5.01□□□□□ -1.61
CD28P10747 AC110597.1-201ENST00000562669 3176 ntBASIC5.01□□□□□ -1.61
CD28P10747 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.01□□□□□ -1.61
CD28P10747 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CD28P10747 AL136531.3-201ENST00000624378 3658 ntBASIC5.01□□□□□ -1.61
CD28P10747 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.01□□□□□ -1.61
CD28P10747 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.01□□□□□ -1.61
CD28P10747 SAGE3P-201ENST00000619800 1635 ntBASIC5.01□□□□□ -1.61
CD28P10747 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CD28P10747 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.01□□□□□ -1.61
CD28P10747 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms