Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
TPM3P06753 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TPM3P06753 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
TPM3P06753 MIR133A2-201ENST00000347538 102 ntBASIC7.04□□□□□ -1.28
TPM3P06753 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC7.04□□□□□ -1.28
TPM3P06753 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
TPM3P06753 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
TPM3P06753 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.04□□□□□ -1.28
TPM3P06753 AL359633.1-201ENST00000421403 310 ntBASIC7.04□□□□□ -1.28
TPM3P06753 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.04□□□□□ -1.28
TPM3P06753 MTND1P10-201ENST00000426108 832 ntBASIC7.04□□□□□ -1.28
TPM3P06753 AC009362.1-201ENST00000427253 406 ntBASIC7.04□□□□□ -1.28
TPM3P06753 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC7.04□□□□□ -1.28
TPM3P06753 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TPM3P06753 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.04□□□□□ -1.28
TPM3P06753 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.04□□□□□ -1.28
TPM3P06753 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC7.04□□□□□ -1.28
TPM3P06753 RPL5P14-201ENST00000494197 878 ntBASIC7.04□□□□□ -1.28
TPM3P06753 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.04□□□□□ -1.28
TPM3P06753 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TPM3P06753 COX6B1P4-201ENST00000519826 484 ntBASIC7.04□□□□□ -1.28
TPM3P06753 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC7.04□□□□□ -1.28
TPM3P06753 MIR4800-201ENST00000537353 80 ntBASIC7.04□□□□□ -1.28
TPM3P06753 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.04□□□□□ -1.28
TPM3P06753 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC7.04□□□□□ -1.28
TPM3P06753 AP006587.6-201ENST00000582128 1091 ntBASIC7.04□□□□□ -1.28
TPM3P06753 AC004890.3-201ENST00000605566 1095 ntBASIC7.04□□□□□ -1.28
TPM3P06753 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.04□□□□□ -1.28
TPM3P06753 AL136097.3-201ENST00000611097 505 ntBASIC7.04□□□□□ -1.28
TPM3P06753 KDM5DP1-201ENST00000622542 298 ntBASIC7.04□□□□□ -1.28
TPM3P06753 AC069542.2-201ENST00000624816 216 ntBASIC7.04□□□□□ -1.28
TPM3P06753 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.04□□□□□ -1.28
TPM3P06753 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.04□□□□□ -1.28
TPM3P06753 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
TPM3P06753 OR7E91P-202ENST00000642062 1198 ntBASIC7.04□□□□□ -1.28
TPM3P06753 AL137141.1-201ENST00000624622 4836 ntBASIC7.04□□□□□ -1.28
TPM3P06753 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC7.04□□□□□ -1.28
TPM3P06753 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TPM3P06753 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TPM3P06753 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TPM3P06753 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TPM3P06753 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
TPM3P06753 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
TPM3P06753 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TPM3P06753 AC092701.1-201ENST00000623627 1551 ntBASIC7.03□□□□□ -1.28
TPM3P06753 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.03□□□□□ -1.28
TPM3P06753 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM3P06753 AC092451.3-201ENST00000625067 1343 ntBASIC7.03□□□□□ -1.28
TPM3P06753 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TPM3P06753 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM3P06753 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM3P06753 RNA5SP453-201ENST00000362503 119 ntBASIC7.03□□□□□ -1.28
TPM3P06753 AL391419.1-201ENST00000398901 1275 ntBASIC7.03□□□□□ -1.28
TPM3P06753 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.03□□□□□ -1.28
TPM3P06753 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC7.03□□□□□ -1.28
TPM3P06753 AL139184.1-202ENST00000422303 222 ntBASIC7.03□□□□□ -1.28
TPM3P06753 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TPM3P06753 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.03□□□□□ -1.28
TPM3P06753 GAPDHP33-201ENST00000443168 1013 ntBASIC7.03□□□□□ -1.28
TPM3P06753 RPS4XP19-201ENST00000460237 736 ntBASIC7.03□□□□□ -1.28
TPM3P06753 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.03□□□□□ -1.28
TPM3P06753 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC7.03□□□□□ -1.28
TPM3P06753 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.03□□□□□ -1.28
TPM3P06753 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC7.03□□□□□ -1.28
TPM3P06753 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC7.03□□□□□ -1.28
TPM3P06753 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC7.03□□□□□ -1.28
TPM3P06753 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.03□□□□□ -1.28
TPM3P06753 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.03□□□□□ -1.28
TPM3P06753 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.03□□□□□ -1.28
TPM3P06753 AC090616.1-201ENST00000583895 447 ntBASIC7.03□□□□□ -1.28
TPM3P06753 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC7.03□□□□□ -1.28
TPM3P06753 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.03□□□□□ -1.28
TPM3P06753 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM3P06753 AC005858.3-201ENST00000624756 589 ntBASIC7.03□□□□□ -1.28
TPM3P06753 AC003992.1-201ENST00000635364 557 ntBASIC7.03□□□□□ -1.28
TPM3P06753 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM3P06753 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM3P06753 RALGAPA1P1-201ENST00000443361 6232 ntBASIC7.03□□□□□ -1.28
TPM3P06753 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TPM3P06753 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC7.03□□□□□ -1.28
TPM3P06753 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
TPM3P06753 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.03□□□□□ -1.28
TPM3P06753 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
TPM3P06753 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM3P06753 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM3P06753 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
TPM3P06753 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
TPM3P06753 AC093671.1-201ENST00000624981 2929 ntBASIC7.02□□□□□ -1.29
TPM3P06753 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.02□□□□□ -1.29
TPM3P06753 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TPM3P06753 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.02□□□□□ -1.29
TPM3P06753 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TPM3P06753 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TPM3P06753 RN7SKP130-201ENST00000364924 301 ntBASIC7.02□□□□□ -1.29
TPM3P06753 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TPM3P06753 DPPA2P2-201ENST00000418220 897 ntBASIC7.02□□□□□ -1.29
TPM3P06753 AC091492.1-201ENST00000419844 272 ntBASIC7.02□□□□□ -1.29
TPM3P06753 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TPM3P06753 CLIC4P3-201ENST00000422221 752 ntBASIC7.02□□□□□ -1.29
TPM3P06753 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms