Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC022415.1-202ENST00000486612 523 ntBASIC6.52□□□□□ -1.37
PDGFBP01127 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFBP01127 OR4D12P-201ENST00000509361 911 ntBASIC6.52□□□□□ -1.37
PDGFBP01127 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.52□□□□□ -1.37
PDGFBP01127 TMEM97P2-201ENST00000517841 403 ntBASIC6.52□□□□□ -1.37
PDGFBP01127 IGLV2-28-201ENST00000520681 304 ntBASIC6.52□□□□□ -1.37
PDGFBP01127 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.52□□□□□ -1.37
PDGFBP01127 AP003396.4-201ENST00000527574 265 ntBASIC6.52□□□□□ -1.37
PDGFBP01127 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.52□□□□□ -1.37
PDGFBP01127 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.52□□□□□ -1.37
PDGFBP01127 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.52□□□□□ -1.37
PDGFBP01127 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.52□□□□□ -1.37
PDGFBP01127 MIR6748-201ENST00000610433 71 ntBASIC6.52□□□□□ -1.37
PDGFBP01127 AC118658.2-201ENST00000618697 459 ntBASIC6.52□□□□□ -1.37
PDGFBP01127 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.52□□□□□ -1.37
PDGFBP01127 AC063952.1-203ENST00000634410 658 ntBASIC6.52□□□□□ -1.37
PDGFBP01127 AC008555.1-201ENST00000561778 2757 ntBASIC6.52□□□□□ -1.37
PDGFBP01127 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.52□□□□□ -1.37
PDGFBP01127 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFBP01127 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.52□□□□□ -1.37
PDGFBP01127 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFBP01127 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFBP01127 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
PDGFBP01127 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
PDGFBP01127 AC034111.1-201ENST00000562143 3770 ntBASIC6.52□□□□□ -1.37
PDGFBP01127 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.51□□□□□ -1.37
PDGFBP01127 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
PDGFBP01127 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFBP01127 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
PDGFBP01127 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFBP01127 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
PDGFBP01127 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.51□□□□□ -1.37
PDGFBP01127 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
PDGFBP01127 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.51□□□□□ -1.37
PDGFBP01127 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFBP01127 RNA5SP346-201ENST00000363541 121 ntBASIC6.51□□□□□ -1.37
PDGFBP01127 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
PDGFBP01127 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFBP01127 VDAC1P2-201ENST00000423609 850 ntBASIC6.51□□□□□ -1.37
PDGFBP01127 NDUFS5P5-201ENST00000437256 321 ntBASIC6.51□□□□□ -1.37
PDGFBP01127 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.51□□□□□ -1.37
PDGFBP01127 SOCS5P1-201ENST00000440415 949 ntBASIC6.51□□□□□ -1.37
PDGFBP01127 AL136455.1-201ENST00000441083 1240 ntBASIC6.51□□□□□ -1.37
PDGFBP01127 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.51□□□□□ -1.37
PDGFBP01127 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.51□□□□□ -1.37
PDGFBP01127 RN7SL369P-201ENST00000477138 299 ntBASIC6.51□□□□□ -1.37
PDGFBP01127 AC093270.2-201ENST00000486157 792 ntBASIC6.51□□□□□ -1.37
PDGFBP01127 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.51□□□□□ -1.37
PDGFBP01127 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.51□□□□□ -1.37
PDGFBP01127 AC027026.1-201ENST00000532323 742 ntBASIC6.51□□□□□ -1.37
PDGFBP01127 DPPA3P2-202ENST00000557188 1219 ntBASIC6.51□□□□□ -1.37
PDGFBP01127 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.51□□□□□ -1.37
PDGFBP01127 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.51□□□□□ -1.37
PDGFBP01127 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.51□□□□□ -1.37
PDGFBP01127 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.51□□□□□ -1.37
PDGFBP01127 AC016252.1-201ENST00000609721 474 ntBASIC6.51□□□□□ -1.37
PDGFBP01127 AC018445.2-201ENST00000622987 260 ntBASIC6.51□□□□□ -1.37
PDGFBP01127 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.51□□□□□ -1.37
PDGFBP01127 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFBP01127 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
PDGFBP01127 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFBP01127 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFBP01127 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
PDGFBP01127 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFBP01127 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.51□□□□□ -1.37
PDGFBP01127 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFBP01127 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 AP000641.1-201ENST00000531988 1639 ntBASIC6.5□□□□□ -1.37
PDGFBP01127 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
PDGFBP01127 Z99129.4-201ENST00000624649 2435 ntBASIC6.5□□□□□ -1.37
PDGFBP01127 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFBP01127 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 AC083806.2-201ENST00000617795 2685 ntBASIC6.5□□□□□ -1.37
PDGFBP01127 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PDGFBP01127 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.5□□□□□ -1.37
PDGFBP01127 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PDGFBP01127 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.5□□□□□ -1.37
PDGFBP01127 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.5□□□□□ -1.37
PDGFBP01127 NRIR-201ENST00000366140 799 ntTSL 3 BASIC6.5□□□□□ -1.37
PDGFBP01127 RN7SKP293-201ENST00000411389 296 ntBASIC6.5□□□□□ -1.37
PDGFBP01127 NPM1P36-201ENST00000415681 835 ntBASIC6.5□□□□□ -1.37
PDGFBP01127 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.5□□□□□ -1.37
PDGFBP01127 GSTA6P-201ENST00000424144 582 ntBASIC6.5□□□□□ -1.37
PDGFBP01127 BX323845.3-201ENST00000428215 527 ntBASIC6.5□□□□□ -1.37
PDGFBP01127 PCBP2P1-201ENST00000437262 977 ntBASIC6.5□□□□□ -1.37
PDGFBP01127 SUMO2P3-201ENST00000438311 288 ntBASIC6.5□□□□□ -1.37
PDGFBP01127 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.5□□□□□ -1.37
PDGFBP01127 RPL34P33-201ENST00000486062 334 ntBASIC6.5□□□□□ -1.37
PDGFBP01127 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.5□□□□□ -1.37
PDGFBP01127 AC131392.1-201ENST00000506490 633 ntBASIC6.5□□□□□ -1.37
PDGFBP01127 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms