Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.49□□□□□ -1.37
SMAD6O43541 RPSAP75-201ENST00000605848 301 ntBASIC6.49□□□□□ -1.37
SMAD6O43541 AC079414.3-201ENST00000612986 1090 ntBASIC6.49□□□□□ -1.37
SMAD6O43541 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.49□□□□□ -1.37
SMAD6O43541 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
SMAD6O43541 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.49□□□□□ -1.37
SMAD6O43541 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SMAD6O43541 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
SMAD6O43541 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SMAD6O43541 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.49□□□□□ -1.37
SMAD6O43541 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SMAD6O43541 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.49□□□□□ -1.37
SMAD6O43541 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SMAD6O43541 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
SMAD6O43541 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.49□□□□□ -1.37
SMAD6O43541 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SMAD6O43541 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SMAD6O43541 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SMAD6O43541 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
SMAD6O43541 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
SMAD6O43541 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.48□□□□□ -1.37
SMAD6O43541 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SMAD6O43541 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SMAD6O43541 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.48□□□□□ -1.37
SMAD6O43541 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SMAD6O43541 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
SMAD6O43541 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SMAD6O43541 NR1H5P-201ENST00000452683 1377 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SMAD6O43541 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SMAD6O43541 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SMAD6O43541 RNU1-65P-201ENST00000363919 148 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 RN7SKP187-201ENST00000365536 330 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.48□□□□□ -1.37
SMAD6O43541 AL035422.1-201ENST00000414193 397 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 AC017078.1-201ENST00000416146 368 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 AC013470.3-201ENST00000420252 1194 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.48□□□□□ -1.37
SMAD6O43541 AC099782.1-201ENST00000425889 474 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.48□□□□□ -1.37
SMAD6O43541 MRPS21P3-201ENST00000436696 262 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 EMC3-AS1-205ENST00000438698 534 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.48□□□□□ -1.37
SMAD6O43541 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.48□□□□□ -1.37
SMAD6O43541 AC118758.1-202ENST00000454719 225 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 AC019084.1-201ENST00000457337 432 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.48□□□□□ -1.37
SMAD6O43541 AC021006.1-201ENST00000489849 553 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SMAD6O43541 RPL37P23-201ENST00000492641 294 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 RN7SL362P-201ENST00000494228 267 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.48□□□□□ -1.37
SMAD6O43541 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.48□□□□□ -1.37
SMAD6O43541 AC084337.1-201ENST00000524809 686 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.48□□□□□ -1.37
SMAD6O43541 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.48□□□□□ -1.37
SMAD6O43541 AL121579.2-201ENST00000555466 590 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.48□□□□□ -1.37
SMAD6O43541 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.48□□□□□ -1.37
SMAD6O43541 AC005332.4-201ENST00000592752 579 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 AL591926.1-201ENST00000620542 217 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 AC073862.4-201ENST00000622982 854 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SMAD6O43541 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SMAD6O43541 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SMAD6O43541 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.48□□□□□ -1.37
SMAD6O43541 AL117378.2-201ENST00000622916 1337 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SMAD6O43541 AC112243.1-201ENST00000623949 3851 ntBASIC6.48□□□□□ -1.37
SMAD6O43541 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.48□□□□□ -1.37
SMAD6O43541 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SMAD6O43541 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.47□□□□□ -1.37
SMAD6O43541 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
SMAD6O43541 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SMAD6O43541 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SMAD6O43541 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
SMAD6O43541 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SMAD6O43541 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
SMAD6O43541 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SMAD6O43541 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SMAD6O43541 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SMAD6O43541 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SMAD6O43541 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SMAD6O43541 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.47□□□□□ -1.37
SMAD6O43541 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SMAD6O43541 AC019070.1-201ENST00000415008 1024 ntBASIC6.47□□□□□ -1.37
SMAD6O43541 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.47□□□□□ -1.37
SMAD6O43541 MTND2P9-201ENST00000422293 931 ntBASIC6.47□□□□□ -1.37
SMAD6O43541 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.47□□□□□ -1.37
SMAD6O43541 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC6.47□□□□□ -1.37
SMAD6O43541 AC094019.1-201ENST00000434678 472 ntBASIC6.47□□□□□ -1.37
SMAD6O43541 SDR42E1P3-201ENST00000438345 502 ntBASIC6.47□□□□□ -1.37
SMAD6O43541 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
SMAD6O43541 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.47□□□□□ -1.37
SMAD6O43541 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.47□□□□□ -1.37
SMAD6O43541 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.47□□□□□ -1.37
SMAD6O43541 AC068491.1-201ENST00000449539 1241 ntBASIC6.47□□□□□ -1.37
SMAD6O43541 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SMAD6O43541 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.47□□□□□ -1.37
SMAD6O43541 RPL12P31-201ENST00000478433 450 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 287.2 ms