Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC128716.1-201ENST00000475129 166 ntBASIC6.1□□□□□ -1.43
SLC28A1O00337 MINOS1P4-201ENST00000515470 318 ntBASIC6.1□□□□□ -1.43
SLC28A1O00337 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.1□□□□□ -1.43
SLC28A1O00337 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.1□□□□□ -1.43
SLC28A1O00337 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.1□□□□□ -1.43
SLC28A1O00337 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.1□□□□□ -1.43
SLC28A1O00337 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.1□□□□□ -1.43
SLC28A1O00337 AC090651.1-201ENST00000567865 634 ntBASIC6.1□□□□□ -1.43
SLC28A1O00337 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.1□□□□□ -1.43
SLC28A1O00337 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.1□□□□□ -1.43
SLC28A1O00337 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.1□□□□□ -1.43
SLC28A1O00337 PPIAP14-201ENST00000577627 496 ntBASIC6.1□□□□□ -1.43
SLC28A1O00337 MIR3189-201ENST00000578735 73 ntBASIC6.1□□□□□ -1.43
SLC28A1O00337 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.1□□□□□ -1.43
SLC28A1O00337 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.1□□□□□ -1.43
SLC28A1O00337 AC015849.6-201ENST00000605454 474 ntBASIC6.1□□□□□ -1.43
SLC28A1O00337 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SLC28A1O00337 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SLC28A1O00337 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.1□□□□□ -1.43
SLC28A1O00337 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.1□□□□□ -1.43
SLC28A1O00337 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.1□□□□□ -1.43
SLC28A1O00337 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SLC28A1O00337 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SLC28A1O00337 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SLC28A1O00337 TET1P1-201ENST00000426627 2301 ntBASIC6.1□□□□□ -1.43
SLC28A1O00337 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SLC28A1O00337 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SLC28A1O00337 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SLC28A1O00337 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.09□□□□□ -1.43
SLC28A1O00337 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SLC28A1O00337 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SLC28A1O00337 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.09□□□□□ -1.43
SLC28A1O00337 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SLC28A1O00337 CCNT2P1-201ENST00000423082 1315 ntBASIC6.09□□□□□ -1.43
SLC28A1O00337 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SLC28A1O00337 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.09□□□□□ -1.43
SLC28A1O00337 AC010894.1-201ENST00000313760 361 ntBASIC6.09□□□□□ -1.43
SLC28A1O00337 RNA5SP514-201ENST00000363717 111 ntBASIC6.09□□□□□ -1.43
SLC28A1O00337 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC6.09□□□□□ -1.43
SLC28A1O00337 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.09□□□□□ -1.43
SLC28A1O00337 RN7SKP129-201ENST00000410288 299 ntBASIC6.09□□□□□ -1.43
SLC28A1O00337 AC083862.1-201ENST00000427378 1242 ntBASIC6.09□□□□□ -1.43
SLC28A1O00337 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.09□□□□□ -1.43
SLC28A1O00337 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.09□□□□□ -1.43
SLC28A1O00337 RPS27AP3-201ENST00000453803 454 ntBASIC6.09□□□□□ -1.43
SLC28A1O00337 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.09□□□□□ -1.43
SLC28A1O00337 RN7SKP67-201ENST00000515905 235 ntBASIC6.09□□□□□ -1.43
SLC28A1O00337 SNORA81.2-201ENST00000516868 170 ntBASIC6.09□□□□□ -1.43
SLC28A1O00337 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.09□□□□□ -1.43
SLC28A1O00337 OR4A6P-201ENST00000534364 970 ntBASIC6.09□□□□□ -1.43
SLC28A1O00337 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.09□□□□□ -1.43
SLC28A1O00337 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.09□□□□□ -1.43
SLC28A1O00337 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.09□□□□□ -1.43
SLC28A1O00337 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.09□□□□□ -1.43
SLC28A1O00337 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.09□□□□□ -1.43
SLC28A1O00337 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.09□□□□□ -1.43
SLC28A1O00337 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.09□□□□□ -1.43
SLC28A1O00337 AC006924.1-201ENST00000610750 559 ntBASIC6.09□□□□□ -1.43
SLC28A1O00337 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.09□□□□□ -1.43
SLC28A1O00337 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.09□□□□□ -1.43
SLC28A1O00337 MIR7159-201ENST00000620587 66 ntBASIC6.09□□□□□ -1.43
SLC28A1O00337 AC027506.1-201ENST00000621395 198 ntBASIC6.09□□□□□ -1.43
SLC28A1O00337 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.09□□□□□ -1.43
SLC28A1O00337 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.09□□□□□ -1.43
SLC28A1O00337 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SLC28A1O00337 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.09□□□□□ -1.43
SLC28A1O00337 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SLC28A1O00337 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SLC28A1O00337 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SLC28A1O00337 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SLC28A1O00337 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
SLC28A1O00337 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.09□□□□□ -1.44
SLC28A1O00337 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
SLC28A1O00337 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
SLC28A1O00337 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.08□□□□□ -1.44
SLC28A1O00337 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SLC28A1O00337 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SLC28A1O00337 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.08□□□□□ -1.44
SLC28A1O00337 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SLC28A1O00337 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.08□□□□□ -1.44
SLC28A1O00337 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SLC28A1O00337 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SLC28A1O00337 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SLC28A1O00337 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SLC28A1O00337 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SLC28A1O00337 RNA5SP308-201ENST00000362532 115 ntBASIC6.08□□□□□ -1.44
SLC28A1O00337 RNU6-167P-201ENST00000384292 106 ntBASIC6.08□□□□□ -1.44
SLC28A1O00337 RANP7-201ENST00000418085 644 ntBASIC6.08□□□□□ -1.44
SLC28A1O00337 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC6.08□□□□□ -1.44
SLC28A1O00337 AL355032.1-201ENST00000472981 438 ntBASIC6.08□□□□□ -1.44
SLC28A1O00337 RN7SL714P-201ENST00000487050 298 ntBASIC6.08□□□□□ -1.44
SLC28A1O00337 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.08□□□□□ -1.44
SLC28A1O00337 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SLC28A1O00337 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.08□□□□□ -1.44
SLC28A1O00337 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.08□□□□□ -1.44
SLC28A1O00337 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.08□□□□□ -1.44
SLC28A1O00337 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.08□□□□□ -1.44
SLC28A1O00337 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.08□□□□□ -1.44
SLC28A1O00337 OR4C49P-201ENST00000563891 900 ntBASIC6.08□□□□□ -1.44
SLC28A1O00337 AC133552.4-201ENST00000576103 676 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms