Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DDX39AO00148 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DDX39AO00148 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DDX39AO00148 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.11□□□□□ -1.27
DDX39AO00148 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DDX39AO00148 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DDX39AO00148 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.11□□□□□ -1.27
DDX39AO00148 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DDX39AO00148 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
DDX39AO00148 AC022905.1-201ENST00000503430 3048 ntBASIC7.11□□□□□ -1.27
DDX39AO00148 OR56A4-201ENST00000330728 1209 ntBASIC7.11□□□□□ -1.27
DDX39AO00148 RNA5SP346-201ENST00000363541 121 ntBASIC7.11□□□□□ -1.27
DDX39AO00148 NPM1P36-201ENST00000415681 835 ntBASIC7.11□□□□□ -1.27
DDX39AO00148 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.11□□□□□ -1.27
DDX39AO00148 AC115283.1-201ENST00000427353 400 ntBASIC7.11□□□□□ -1.27
DDX39AO00148 AC002069.1-201ENST00000429649 1159 ntBASIC7.11□□□□□ -1.27
DDX39AO00148 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DDX39AO00148 PSMD10P2-201ENST00000432890 672 ntBASIC7.11□□□□□ -1.27
DDX39AO00148 RPSAP40-201ENST00000442343 891 ntBASIC7.11□□□□□ -1.27
DDX39AO00148 AC010240.2-201ENST00000445363 1205 ntBASIC7.11□□□□□ -1.27
DDX39AO00148 HMGB1P7-201ENST00000450921 612 ntBASIC7.11□□□□□ -1.27
DDX39AO00148 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DDX39AO00148 AP002884.1-201ENST00000479691 655 ntBASIC7.11□□□□□ -1.27
DDX39AO00148 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.11□□□□□ -1.27
DDX39AO00148 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.11□□□□□ -1.27
DDX39AO00148 AC095052.1-201ENST00000509955 863 ntBASIC7.11□□□□□ -1.27
DDX39AO00148 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
DDX39AO00148 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.11□□□□□ -1.27
DDX39AO00148 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.11□□□□□ -1.27
DDX39AO00148 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
DDX39AO00148 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DDX39AO00148 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.11□□□□□ -1.27
DDX39AO00148 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DDX39AO00148 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.11□□□□□ -1.27
DDX39AO00148 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DDX39AO00148 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC7.11□□□□□ -1.27
DDX39AO00148 DYNLL1P1-201ENST00000595442 269 ntBASIC7.11□□□□□ -1.27
DDX39AO00148 AC091167.5-201ENST00000605689 894 ntBASIC7.11□□□□□ -1.27
DDX39AO00148 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.11□□□□□ -1.27
DDX39AO00148 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.11□□□□□ -1.27
DDX39AO00148 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.11□□□□□ -1.27
DDX39AO00148 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
DDX39AO00148 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
DDX39AO00148 AC011455.2-201ENST00000599320 3336 ntBASIC7.11□□□□□ -1.27
DDX39AO00148 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DDX39AO00148 AC005618.1-201ENST00000606901 3148 ntBASIC7.11□□□□□ -1.27
DDX39AO00148 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DDX39AO00148 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
DDX39AO00148 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
DDX39AO00148 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DDX39AO00148 AC092724.1-201ENST00000624623 3397 ntBASIC7.11□□□□□ -1.27
DDX39AO00148 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DDX39AO00148 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.11□□□□□ -1.27
DDX39AO00148 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
DDX39AO00148 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
DDX39AO00148 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DDX39AO00148 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
DDX39AO00148 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
DDX39AO00148 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DDX39AO00148 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.1□□□□□ -1.27
DDX39AO00148 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
DDX39AO00148 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
DDX39AO00148 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DDX39AO00148 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DDX39AO00148 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.1□□□□□ -1.27
DDX39AO00148 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DDX39AO00148 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.1□□□□□ -1.27
DDX39AO00148 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.1□□□□□ -1.27
DDX39AO00148 VN1R38P-201ENST00000450265 887 ntBASIC7.1□□□□□ -1.27
DDX39AO00148 AC026254.2-201ENST00000475295 371 ntBASIC7.1□□□□□ -1.27
DDX39AO00148 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC7.1□□□□□ -1.27
DDX39AO00148 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.1□□□□□ -1.27
DDX39AO00148 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
DDX39AO00148 AC006512.2-201ENST00000543250 486 ntBASIC7.1□□□□□ -1.27
DDX39AO00148 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC7.1□□□□□ -1.27
DDX39AO00148 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
DDX39AO00148 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC7.1□□□□□ -1.27
DDX39AO00148 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.1□□□□□ -1.27
DDX39AO00148 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
DDX39AO00148 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.1□□□□□ -1.27
DDX39AO00148 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.1□□□□□ -1.27
DDX39AO00148 AP005136.2-201ENST00000583253 1049 ntBASIC7.1□□□□□ -1.27
DDX39AO00148 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
DDX39AO00148 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.1□□□□□ -1.27
DDX39AO00148 AC024255.1-201ENST00000614376 102 ntBASIC7.1□□□□□ -1.27
DDX39AO00148 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.1□□□□□ -1.27
DDX39AO00148 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC7.1□□□□□ -1.27
DDX39AO00148 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.1□□□□□ -1.27
DDX39AO00148 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DDX39AO00148 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.1□□□□□ -1.27
DDX39AO00148 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DDX39AO00148 CUBNP3-201ENST00000457461 1784 ntBASIC7.1□□□□□ -1.27
DDX39AO00148 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.1□□□□□ -1.27
DDX39AO00148 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
DDX39AO00148 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DDX39AO00148 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
DDX39AO00148 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
DDX39AO00148 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
DDX39AO00148 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
DDX39AO00148 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms