Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 PTBP1P-201ENST00000554374 1601 ntBASIC14.88□□□□□ -0.03
HLA-DRB4X5D2U9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 KRT8P20-201ENST00000423953 1409 ntBASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 MIR4758-201ENST00000577688 71 ntBASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 AL031963.3-201ENST00000606441 850 ntBASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DRB4X5D2U9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 HLA-G-202ENST00000376815 851 ntBASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 HLA-G-203ENST00000376818 1127 ntBASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 AC023632.3-201ENST00000521633 145 ntBASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 AL109923.1-201ENST00000618799 583 ntBASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DRB4X5D2U9 BX119927.1-201ENST00000636596 1552 ntBASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 KRT8P17-201ENST00000453110 1448 ntBASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 DUSP5P2-201ENST00000426873 1033 ntBASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms