Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB1Q9Y5F3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDHB1Q9Y5F3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHB1Q9Y5F3 KRT16P6-202ENST00000425692 1426 ntBASIC19.81■□□□□ 0.76
PCDHB1Q9Y5F3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB1Q9Y5F3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB1Q9Y5F3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB1Q9Y5F3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PCDHB1Q9Y5F3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
PCDHB1Q9Y5F3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PCDHB1Q9Y5F3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 REXO1L12P-201ENST00000622156 912 ntBASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
PCDHB1Q9Y5F3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 MIR1224-201ENST00000408193 85 ntBASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDHB1Q9Y5F3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PCDHB1Q9Y5F3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHB1Q9Y5F3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB1Q9Y5F3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB1Q9Y5F3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB1Q9Y5F3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHB1Q9Y5F3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB1Q9Y5F3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHB1Q9Y5F3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDHB1Q9Y5F3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB1Q9Y5F3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB1Q9Y5F3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB1Q9Y5F3 FAM210CP-201ENST00000445714 574 ntBASIC19.78■□□□□ 0.76
PCDHB1Q9Y5F3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHB1Q9Y5F3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
PCDHB1Q9Y5F3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDHB1Q9Y5F3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDHB1Q9Y5F3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDHB1Q9Y5F3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB1Q9Y5F3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB1Q9Y5F3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHB1Q9Y5F3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHB1Q9Y5F3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB1Q9Y5F3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB1Q9Y5F3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB1Q9Y5F3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PCDHB1Q9Y5F3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHB1Q9Y5F3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB1Q9Y5F3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB1Q9Y5F3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHB1Q9Y5F3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PCDHB1Q9Y5F3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
PCDHB1Q9Y5F3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB1Q9Y5F3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB1Q9Y5F3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB1Q9Y5F3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB1Q9Y5F3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB1Q9Y5F3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PCDHB1Q9Y5F3 SLC25A24-204ENST00000569674 2357 ntBASIC19.77■□□□□ 0.75
PCDHB1Q9Y5F3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 AL691432.2-201ENST00000607222 2038 ntBASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms