Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 WWOX-216ENST00000569818 525 ntBASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 AC004264.1-201ENST00000608354 794 ntBASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDLIM7Q9NR12 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDLIM7Q9NR12 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDLIM7Q9NR12 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
PDLIM7Q9NR12 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDLIM7Q9NR12 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDLIM7Q9NR12 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.23■■□□□ 1.15
PDLIM7Q9NR12 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.23■■□□□ 1.15
PDLIM7Q9NR12 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.23■■□□□ 1.15
PDLIM7Q9NR12 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
PDLIM7Q9NR12 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
PDLIM7Q9NR12 AL121906.2-201ENST00000621597 723 ntBASIC22.23■■□□□ 1.15
PDLIM7Q9NR12 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.23■■□□□ 1.15
PDLIM7Q9NR12 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PDLIM7Q9NR12 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDLIM7Q9NR12 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.23■■□□□ 1.15
PDLIM7Q9NR12 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.23■■□□□ 1.15
PDLIM7Q9NR12 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDLIM7Q9NR12 KRT8P17-201ENST00000453110 1448 ntBASIC22.23■■□□□ 1.15
PDLIM7Q9NR12 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDLIM7Q9NR12 AC073314.1-201ENST00000568729 2216 ntBASIC22.22■■□□□ 1.15
PDLIM7Q9NR12 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PDLIM7Q9NR12 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDLIM7Q9NR12 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC22.22■■□□□ 1.15
PDLIM7Q9NR12 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.22■■□□□ 1.15
PDLIM7Q9NR12 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.22■■□□□ 1.15
PDLIM7Q9NR12 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.22■■□□□ 1.15
PDLIM7Q9NR12 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC22.22■■□□□ 1.15
PDLIM7Q9NR12 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDLIM7Q9NR12 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDLIM7Q9NR12 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PDLIM7Q9NR12 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
PDLIM7Q9NR12 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.22■■□□□ 1.15
PDLIM7Q9NR12 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDLIM7Q9NR12 AC020907.5-201ENST00000624372 1936 ntBASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 AC010203.1-204ENST00000548782 407 ntBASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 AP005212.1-201ENST00000581547 1997 ntBASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM7Q9NR12 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
PDLIM7Q9NR12 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
PDLIM7Q9NR12 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 AC006011.2-201ENST00000621313 1158 ntBASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDLIM7Q9NR12 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.19■■□□□ 1.14
PDLIM7Q9NR12 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
PDLIM7Q9NR12 FEM1AP1-201ENST00000431297 1995 ntBASIC22.19■■□□□ 1.14
PDLIM7Q9NR12 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDLIM7Q9NR12 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDLIM7Q9NR12 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC22.19■■□□□ 1.14
PDLIM7Q9NR12 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.19■■□□□ 1.14
PDLIM7Q9NR12 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC22.19■■□□□ 1.14
PDLIM7Q9NR12 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.19■■□□□ 1.14
PDLIM7Q9NR12 CR392000.1-201ENST00000624770 1228 ntBASIC22.19■■□□□ 1.14
PDLIM7Q9NR12 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDLIM7Q9NR12 KRT8P20-201ENST00000423953 1409 ntBASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms