Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BBS4Q96RK4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BBS4Q96RK4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BBS4Q96RK4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BBS4Q96RK4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BBS4Q96RK4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
BBS4Q96RK4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
BBS4Q96RK4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.75■□□□□ 0.59
BBS4Q96RK4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BBS4Q96RK4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
BBS4Q96RK4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BBS4Q96RK4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
BBS4Q96RK4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.75■□□□□ 0.59
BBS4Q96RK4 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.75■□□□□ 0.59
BBS4Q96RK4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
BBS4Q96RK4 TSPY6P-201ENST00000448518 926 ntBASIC18.75■□□□□ 0.59
BBS4Q96RK4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.75■□□□□ 0.59
BBS4Q96RK4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BBS4Q96RK4 MIR4758-201ENST00000577688 71 ntBASIC18.75■□□□□ 0.59
BBS4Q96RK4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.75■□□□□ 0.59
BBS4Q96RK4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.75■□□□□ 0.59
BBS4Q96RK4 AC092118.2-201ENST00000613495 667 ntBASIC18.75■□□□□ 0.59
BBS4Q96RK4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.75■□□□□ 0.59
BBS4Q96RK4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.75■□□□□ 0.59
BBS4Q96RK4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
BBS4Q96RK4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.75■□□□□ 0.59
BBS4Q96RK4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BBS4Q96RK4 HCG11-201ENST00000411553 5696 ntBASIC18.75■□□□□ 0.59
BBS4Q96RK4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BBS4Q96RK4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BBS4Q96RK4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BBS4Q96RK4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BBS4Q96RK4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BBS4Q96RK4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BBS4Q96RK4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BBS4Q96RK4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BBS4Q96RK4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BBS4Q96RK4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BBS4Q96RK4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
BBS4Q96RK4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.73■□□□□ 0.59
BBS4Q96RK4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
BBS4Q96RK4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.73■□□□□ 0.59
BBS4Q96RK4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BBS4Q96RK4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BBS4Q96RK4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.73■□□□□ 0.59
BBS4Q96RK4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BBS4Q96RK4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.73■□□□□ 0.59
BBS4Q96RK4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.73■□□□□ 0.59
BBS4Q96RK4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BBS4Q96RK4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BBS4Q96RK4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
BBS4Q96RK4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BBS4Q96RK4 GUSBP6-202ENST00000438529 1198 ntBASIC18.73■□□□□ 0.59
BBS4Q96RK4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BBS4Q96RK4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.73■□□□□ 0.59
BBS4Q96RK4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.73■□□□□ 0.59
BBS4Q96RK4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.73■□□□□ 0.59
BBS4Q96RK4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.73■□□□□ 0.59
BBS4Q96RK4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
BBS4Q96RK4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.73■□□□□ 0.59
BBS4Q96RK4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BBS4Q96RK4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BBS4Q96RK4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BBS4Q96RK4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BBS4Q96RK4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BBS4Q96RK4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BBS4Q96RK4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BBS4Q96RK4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BBS4Q96RK4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
BBS4Q96RK4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BBS4Q96RK4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
BBS4Q96RK4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BBS4Q96RK4 AL390719.1-204ENST00000412397 1219 ntBASIC18.72■□□□□ 0.59
BBS4Q96RK4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.72■□□□□ 0.59
BBS4Q96RK4 AC091874.3-201ENST00000512672 1195 ntBASIC18.72■□□□□ 0.59
BBS4Q96RK4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.72■□□□□ 0.59
BBS4Q96RK4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BBS4Q96RK4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BBS4Q96RK4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms