Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.9■□□□□ 0.78
HMGB4Q8WW32 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.9■□□□□ 0.78
HMGB4Q8WW32 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.9■□□□□ 0.78
HMGB4Q8WW32 C1QL1P1-201ENST00000568105 661 ntBASIC19.9■□□□□ 0.78
HMGB4Q8WW32 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.9■□□□□ 0.78
HMGB4Q8WW32 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.9■□□□□ 0.78
HMGB4Q8WW32 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.9■□□□□ 0.78
HMGB4Q8WW32 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMGB4Q8WW32 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HMGB4Q8WW32 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGB4Q8WW32 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGB4Q8WW32 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGB4Q8WW32 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HMGB4Q8WW32 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGB4Q8WW32 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
HMGB4Q8WW32 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.89■□□□□ 0.77
HMGB4Q8WW32 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGB4Q8WW32 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HMGB4Q8WW32 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.89■□□□□ 0.77
HMGB4Q8WW32 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.89■□□□□ 0.77
HMGB4Q8WW32 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.89■□□□□ 0.77
HMGB4Q8WW32 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.89■□□□□ 0.77
HMGB4Q8WW32 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.89■□□□□ 0.77
HMGB4Q8WW32 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGB4Q8WW32 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.89■□□□□ 0.77
HMGB4Q8WW32 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HMGB4Q8WW32 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 SLC25A3P1-201ENST00000443844 931 ntBASIC19.88■□□□□ 0.77
HMGB4Q8WW32 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.88■□□□□ 0.77
HMGB4Q8WW32 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGB4Q8WW32 FSCN1P1-201ENST00000568912 1481 ntBASIC19.87■□□□□ 0.77
HMGB4Q8WW32 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.87■□□□□ 0.77
HMGB4Q8WW32 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HMGB4Q8WW32 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
HMGB4Q8WW32 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.87■□□□□ 0.77
HMGB4Q8WW32 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
HMGB4Q8WW32 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.87■□□□□ 0.77
HMGB4Q8WW32 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.87■□□□□ 0.77
HMGB4Q8WW32 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HMGB4Q8WW32 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 KRT16P6-202ENST00000425692 1426 ntBASIC19.86■□□□□ 0.77
HMGB4Q8WW32 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.86■□□□□ 0.77
HMGB4Q8WW32 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.86■□□□□ 0.77
HMGB4Q8WW32 AL445675.2-201ENST00000620291 557 ntBASIC19.86■□□□□ 0.77
HMGB4Q8WW32 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 AC116351.2-201ENST00000606540 1585 ntBASIC19.86■□□□□ 0.77
HMGB4Q8WW32 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGB4Q8WW32 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
HMGB4Q8WW32 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGB4Q8WW32 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.85■□□□□ 0.77
HMGB4Q8WW32 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGB4Q8WW32 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.85■□□□□ 0.77
HMGB4Q8WW32 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMGB4Q8WW32 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms