Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 AC120498.10-201ENST00000621827 505 ntBASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 RARRES2P1-201ENST00000474487 481 ntBASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM4Q8WVI0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 AC020916.1-201ENST00000587762 1774 ntBASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.9■□□□□ 0.3
SMIM4Q8WVI0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SMIM4Q8WVI0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.89■□□□□ 0.3
SMIM4Q8WVI0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SMIM4Q8WVI0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.89■□□□□ 0.3
SMIM4Q8WVI0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
SMIM4Q8WVI0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SMIM4Q8WVI0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
SMIM4Q8WVI0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 AC018470.1-201ENST00000624790 3129 ntBASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 MIR4767-201ENST00000582827 78 ntBASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 MIR4466-201ENST00000606121 54 ntBASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 AL161938.1-201ENST00000569833 2180 ntBASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 LTB4R2-202ENST00000528054 3092 ntBASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms