Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC2Q8TAQ2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.2■■□□□ 1.3
SMARCC2Q8TAQ2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC2Q8TAQ2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC2Q8TAQ2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.2■■□□□ 1.3
SMARCC2Q8TAQ2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.2■■□□□ 1.3
SMARCC2Q8TAQ2 TMEM191A-211ENST00000637163 1067 ntBASIC23.2■■□□□ 1.3
SMARCC2Q8TAQ2 AC007952.6-201ENST00000573168 2673 ntBASIC23.2■■□□□ 1.3
SMARCC2Q8TAQ2 AC003957.1-201ENST00000625108 2673 ntBASIC23.2■■□□□ 1.3
SMARCC2Q8TAQ2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC2Q8TAQ2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC2Q8TAQ2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC2Q8TAQ2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 KRT16P6-202ENST00000425692 1426 ntBASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.19■■□□□ 1.3
SMARCC2Q8TAQ2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCC2Q8TAQ2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCC2Q8TAQ2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCC2Q8TAQ2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCC2Q8TAQ2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.18■■□□□ 1.3
SMARCC2Q8TAQ2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCC2Q8TAQ2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.18■■□□□ 1.3
SMARCC2Q8TAQ2 AP003097.1-201ENST00000530657 1135 ntBASIC23.18■■□□□ 1.3
SMARCC2Q8TAQ2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCC2Q8TAQ2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
SMARCC2Q8TAQ2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC23.18■■□□□ 1.3
SMARCC2Q8TAQ2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.18■■□□□ 1.3
SMARCC2Q8TAQ2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.18■■□□□ 1.3
SMARCC2Q8TAQ2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCC2Q8TAQ2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCC2Q8TAQ2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SMARCC2Q8TAQ2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.17■■□□□ 1.3
SMARCC2Q8TAQ2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCC2Q8TAQ2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.17■■□□□ 1.3
SMARCC2Q8TAQ2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.17■■□□□ 1.3
SMARCC2Q8TAQ2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCC2Q8TAQ2 AC026366.1-201ENST00000488803 879 ntBASIC23.17■■□□□ 1.3
SMARCC2Q8TAQ2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCC2Q8TAQ2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.17■■□□□ 1.3
SMARCC2Q8TAQ2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.17■■□□□ 1.3
SMARCC2Q8TAQ2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCC2Q8TAQ2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
SMARCC2Q8TAQ2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCC2Q8TAQ2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC2Q8TAQ2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 HLA-G-202ENST00000376815 851 ntBASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 HLA-G-203ENST00000376818 1127 ntBASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms