Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.86■□□□□ 0.45
SHFQ7M4L6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.86■□□□□ 0.45
SHFQ7M4L6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHFQ7M4L6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHFQ7M4L6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.86■□□□□ 0.45
SHFQ7M4L6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHFQ7M4L6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.86■□□□□ 0.45
SHFQ7M4L6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SHFQ7M4L6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.86■□□□□ 0.45
SHFQ7M4L6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SHFQ7M4L6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
SHFQ7M4L6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHFQ7M4L6 AC093503.3-201ENST00000624917 2352 ntBASIC17.86■□□□□ 0.45
SHFQ7M4L6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SHFQ7M4L6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHFQ7M4L6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHFQ7M4L6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHFQ7M4L6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHFQ7M4L6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHFQ7M4L6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHFQ7M4L6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHFQ7M4L6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHFQ7M4L6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHFQ7M4L6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SHFQ7M4L6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHFQ7M4L6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.85■□□□□ 0.45
SHFQ7M4L6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.85■□□□□ 0.45
SHFQ7M4L6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
SHFQ7M4L6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHFQ7M4L6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.85■□□□□ 0.45
SHFQ7M4L6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHFQ7M4L6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.85■□□□□ 0.45
SHFQ7M4L6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHFQ7M4L6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHFQ7M4L6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
SHFQ7M4L6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHFQ7M4L6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.84■□□□□ 0.45
SHFQ7M4L6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHFQ7M4L6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHFQ7M4L6 Z82202.1-201ENST00000623446 1880 ntBASIC17.84■□□□□ 0.45
SHFQ7M4L6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
SHFQ7M4L6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHFQ7M4L6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SHFQ7M4L6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHFQ7M4L6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHFQ7M4L6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHFQ7M4L6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHFQ7M4L6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.84■□□□□ 0.45
SHFQ7M4L6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.84■□□□□ 0.45
SHFQ7M4L6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SHFQ7M4L6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHFQ7M4L6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.84■□□□□ 0.45
SHFQ7M4L6 AL591742.1-201ENST00000604433 565 ntBASIC17.84■□□□□ 0.45
SHFQ7M4L6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHFQ7M4L6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
SHFQ7M4L6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHFQ7M4L6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHFQ7M4L6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHFQ7M4L6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHFQ7M4L6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHFQ7M4L6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.83■□□□□ 0.45
SHFQ7M4L6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.83■□□□□ 0.45
SHFQ7M4L6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SHFQ7M4L6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHFQ7M4L6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.83■□□□□ 0.45
SHFQ7M4L6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.83■□□□□ 0.45
SHFQ7M4L6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.83■□□□□ 0.45
SHFQ7M4L6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHFQ7M4L6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SHFQ7M4L6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.83■□□□□ 0.45
SHFQ7M4L6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SHFQ7M4L6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.83■□□□□ 0.45
SHFQ7M4L6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHFQ7M4L6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHFQ7M4L6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.83■□□□□ 0.44
SHFQ7M4L6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHFQ7M4L6 TERF1P5-201ENST00000477545 1207 ntBASIC17.83■□□□□ 0.44
SHFQ7M4L6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.83■□□□□ 0.44
SHFQ7M4L6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SHFQ7M4L6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SHFQ7M4L6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.83■□□□□ 0.44
SHFQ7M4L6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.83■□□□□ 0.44
SHFQ7M4L6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHFQ7M4L6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHFQ7M4L6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHFQ7M4L6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.83■□□□□ 0.44
SHFQ7M4L6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHFQ7M4L6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.82■□□□□ 0.44
SHFQ7M4L6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SHFQ7M4L6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.82■□□□□ 0.44
SHFQ7M4L6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHFQ7M4L6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHFQ7M4L6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.82■□□□□ 0.44
SHFQ7M4L6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SHFQ7M4L6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHFQ7M4L6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SHFQ7M4L6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.82■□□□□ 0.44
SHFQ7M4L6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHFQ7M4L6 AL356652.1-201ENST00000615962 565 ntBASIC17.82■□□□□ 0.44
SHFQ7M4L6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms