Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VARS2Q5ST30 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.01■□□□□ 0.95
VARS2Q5ST30 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
VARS2Q5ST30 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VARS2Q5ST30 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.01■□□□□ 0.95
VARS2Q5ST30 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VARS2Q5ST30 KSR1P1-201ENST00000446298 240 ntBASIC21.01■□□□□ 0.95
VARS2Q5ST30 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.01■□□□□ 0.95
VARS2Q5ST30 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.01■□□□□ 0.95
VARS2Q5ST30 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.01■□□□□ 0.95
VARS2Q5ST30 CR392000.1-201ENST00000624770 1228 ntBASIC21.01■□□□□ 0.95
VARS2Q5ST30 AC133561.5-201ENST00000635547 218 ntBASIC21.01■□□□□ 0.95
VARS2Q5ST30 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VARS2Q5ST30 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VARS2Q5ST30 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VARS2Q5ST30 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VARS2Q5ST30 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VARS2Q5ST30 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
VARS2Q5ST30 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VARS2Q5ST30 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.01■□□□□ 0.95
VARS2Q5ST30 AL137060.1-201ENST00000618151 2648 ntBASIC21■□□□□ 0.95
VARS2Q5ST30 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21■□□□□ 0.95
VARS2Q5ST30 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VARS2Q5ST30 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21■□□□□ 0.95
VARS2Q5ST30 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21■□□□□ 0.95
VARS2Q5ST30 YBX1P10-201ENST00000444752 975 ntBASIC21■□□□□ 0.95
VARS2Q5ST30 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21■□□□□ 0.95
VARS2Q5ST30 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21■□□□□ 0.95
VARS2Q5ST30 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VARS2Q5ST30 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21■□□□□ 0.95
VARS2Q5ST30 C1QL1P1-201ENST00000568105 661 ntBASIC21■□□□□ 0.95
VARS2Q5ST30 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21■□□□□ 0.95
VARS2Q5ST30 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21■□□□□ 0.95
VARS2Q5ST30 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21■□□□□ 0.95
VARS2Q5ST30 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21■□□□□ 0.95
VARS2Q5ST30 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
VARS2Q5ST30 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VARS2Q5ST30 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
VARS2Q5ST30 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VARS2Q5ST30 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VARS2Q5ST30 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VARS2Q5ST30 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
VARS2Q5ST30 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VARS2Q5ST30 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
VARS2Q5ST30 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.99■□□□□ 0.95
VARS2Q5ST30 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VARS2Q5ST30 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.99■□□□□ 0.95
VARS2Q5ST30 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VARS2Q5ST30 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.99■□□□□ 0.95
VARS2Q5ST30 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VARS2Q5ST30 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.99■□□□□ 0.95
VARS2Q5ST30 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.99■□□□□ 0.95
VARS2Q5ST30 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VARS2Q5ST30 REXO1L10P-201ENST00000615707 1290 ntBASIC20.99■□□□□ 0.95
VARS2Q5ST30 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VARS2Q5ST30 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VARS2Q5ST30 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
VARS2Q5ST30 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VARS2Q5ST30 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VARS2Q5ST30 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
VARS2Q5ST30 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VARS2Q5ST30 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
VARS2Q5ST30 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.98■□□□□ 0.95
VARS2Q5ST30 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VARS2Q5ST30 KRT16P1-201ENST00000399124 1418 ntBASIC20.98■□□□□ 0.95
VARS2Q5ST30 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VARS2Q5ST30 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
VARS2Q5ST30 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VARS2Q5ST30 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
VARS2Q5ST30 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VARS2Q5ST30 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.98■□□□□ 0.95
VARS2Q5ST30 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.98■□□□□ 0.95
VARS2Q5ST30 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VARS2Q5ST30 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VARS2Q5ST30 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VARS2Q5ST30 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VARS2Q5ST30 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
VARS2Q5ST30 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
VARS2Q5ST30 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
VARS2Q5ST30 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
VARS2Q5ST30 BX119927.1-201ENST00000636596 1552 ntBASIC20.97■□□□□ 0.95
VARS2Q5ST30 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.97■□□□□ 0.95
VARS2Q5ST30 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VARS2Q5ST30 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VARS2Q5ST30 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.97■□□□□ 0.95
VARS2Q5ST30 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VARS2Q5ST30 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VARS2Q5ST30 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VARS2Q5ST30 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.97■□□□□ 0.95
VARS2Q5ST30 RBM17P1-201ENST00000453646 1190 ntBASIC20.97■□□□□ 0.95
VARS2Q5ST30 KRT18P16-201ENST00000510337 1294 ntBASIC20.97■□□□□ 0.95
VARS2Q5ST30 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
VARS2Q5ST30 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.97■□□□□ 0.95
VARS2Q5ST30 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.97■□□□□ 0.95
VARS2Q5ST30 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VARS2Q5ST30 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.97■□□□□ 0.95
VARS2Q5ST30 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.97■□□□□ 0.95
VARS2Q5ST30 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
VARS2Q5ST30 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VARS2Q5ST30 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms