Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-1P50220 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-1P50220 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-1P50220 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-1P50220 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-1P50220 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-1P50220 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Nkx2-1P50220 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-1P50220 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
Nkx2-1P50220 Gm7514-201ENSMUST00000209475 934 ntBASIC14.18□□□□□ -0.14
Nkx2-1P50220 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-1P50220 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-1P50220 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-1P50220 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-1P50220 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-1P50220 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-1P50220 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-1P50220 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-1P50220 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-1P50220 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-1P50220 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.17□□□□□ -0.14
Nkx2-1P50220 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-1P50220 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-1P50220 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-1P50220 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.17□□□□□ -0.14
Nkx2-1P50220 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-1P50220 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.17□□□□□ -0.14
Nkx2-1P50220 AV356131-201ENSMUST00000206201 750 ntBASIC14.17□□□□□ -0.14
Nkx2-1P50220 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-1P50220 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.17□□□□□ -0.14
Nkx2-1P50220 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-1P50220 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.17□□□□□ -0.14
Nkx2-1P50220 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-1P50220 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nkx2-1P50220 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nkx2-1P50220 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-1P50220 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nkx2-1P50220 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-1P50220 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-1P50220 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-1P50220 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-1P50220 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-1P50220 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-1P50220 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Gm8495-201ENSMUST00000188740 694 ntBASIC14.16□□□□□ -0.14
Nkx2-1P50220 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-1P50220 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-1P50220 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.15□□□□□ -0.14
Nkx2-1P50220 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Nkx2-1P50220 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-1P50220 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-1P50220 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-1P50220 Dancr-204ENSMUST00000132389 2347 ntBASIC14.14□□□□□ -0.15
Nkx2-1P50220 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-1P50220 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-1P50220 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-1P50220 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.14□□□□□ -0.15
Nkx2-1P50220 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-1P50220 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Nkx2-1P50220 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms