Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRIA1P42261 GUSBP6-202ENST00000438529 1198 ntBASIC20.06■□□□□ 0.8
GRIA1P42261 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.06■□□□□ 0.8
GRIA1P42261 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.06■□□□□ 0.8
GRIA1P42261 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.06■□□□□ 0.8
GRIA1P42261 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GRIA1P42261 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
GRIA1P42261 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GRIA1P42261 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRIA1P42261 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.06■□□□□ 0.8
GRIA1P42261 AC005332.7-201ENST00000614046 2005 ntBASIC20.06■□□□□ 0.8
GRIA1P42261 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.06■□□□□ 0.8
GRIA1P42261 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
GRIA1P42261 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRIA1P42261 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRIA1P42261 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRIA1P42261 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRIA1P42261 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRIA1P42261 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
GRIA1P42261 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GRIA1P42261 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRIA1P42261 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
GRIA1P42261 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GRIA1P42261 AP001271.2-201ENST00000624018 1556 ntBASIC20.05■□□□□ 0.8
GRIA1P42261 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRIA1P42261 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GRIA1P42261 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GRIA1P42261 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
GRIA1P42261 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
GRIA1P42261 AC006970.2-201ENST00000450065 779 ntBASIC20.05■□□□□ 0.8
GRIA1P42261 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.05■□□□□ 0.8
GRIA1P42261 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.05■□□□□ 0.8
GRIA1P42261 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
GRIA1P42261 AL121832.2-201ENST00000610979 668 ntBASIC20.05■□□□□ 0.8
GRIA1P42261 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.05■□□□□ 0.8
GRIA1P42261 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
GRIA1P42261 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GRIA1P42261 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRIA1P42261 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRIA1P42261 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.05■□□□□ 0.8
GRIA1P42261 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRIA1P42261 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRIA1P42261 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GRIA1P42261 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRIA1P42261 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.04■□□□□ 0.8
GRIA1P42261 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRIA1P42261 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRIA1P42261 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
GRIA1P42261 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.04■□□□□ 0.8
GRIA1P42261 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRIA1P42261 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GRIA1P42261 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRIA1P42261 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GRIA1P42261 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.04■□□□□ 0.8
GRIA1P42261 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.04■□□□□ 0.8
GRIA1P42261 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.04■□□□□ 0.8
GRIA1P42261 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
GRIA1P42261 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GRIA1P42261 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GRIA1P42261 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.03■□□□□ 0.8
GRIA1P42261 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRIA1P42261 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GRIA1P42261 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.03■□□□□ 0.8
GRIA1P42261 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.03■□□□□ 0.8
GRIA1P42261 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
GRIA1P42261 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRIA1P42261 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRIA1P42261 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GRIA1P42261 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRIA1P42261 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.03■□□□□ 0.8
GRIA1P42261 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
GRIA1P42261 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRIA1P42261 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GRIA1P42261 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GRIA1P42261 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRIA1P42261 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
GRIA1P42261 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.03■□□□□ 0.8
GRIA1P42261 DUSP5P2-201ENST00000426873 1033 ntBASIC20.03■□□□□ 0.8
GRIA1P42261 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.03■□□□□ 0.8
GRIA1P42261 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.03■□□□□ 0.8
GRIA1P42261 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
GRIA1P42261 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.03■□□□□ 0.8
GRIA1P42261 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.03■□□□□ 0.8
GRIA1P42261 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.03■□□□□ 0.8
GRIA1P42261 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRIA1P42261 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GRIA1P42261 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRIA1P42261 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRIA1P42261 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.03■□□□□ 0.8
GRIA1P42261 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GRIA1P42261 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GRIA1P42261 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GRIA1P42261 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
GRIA1P42261 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
GRIA1P42261 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GRIA1P42261 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GRIA1P42261 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.02■□□□□ 0.8
GRIA1P42261 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GRIA1P42261 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.02■□□□□ 0.8
GRIA1P42261 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms