Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNA3P32297 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
CHRNA3P32297 CYP2T3P-201ENST00000601990 817 ntBASIC20.84■□□□□ 0.93
CHRNA3P32297 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNA3P32297 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNA3P32297 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNA3P32297 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNA3P32297 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNA3P32297 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNA3P32297 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNA3P32297 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRNA3P32297 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRNA3P32297 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CHRNA3P32297 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRNA3P32297 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.83■□□□□ 0.93
CHRNA3P32297 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHRNA3P32297 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.83■□□□□ 0.93
CHRNA3P32297 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRNA3P32297 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRNA3P32297 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRNA3P32297 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHRNA3P32297 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRNA3P32297 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.83■□□□□ 0.93
CHRNA3P32297 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHRNA3P32297 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.83■□□□□ 0.93
CHRNA3P32297 MCRIP2P1-201ENST00000394346 511 ntBASIC20.83■□□□□ 0.93
CHRNA3P32297 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.83■□□□□ 0.93
CHRNA3P32297 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.83■□□□□ 0.93
CHRNA3P32297 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.83■□□□□ 0.93
CHRNA3P32297 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.83■□□□□ 0.93
CHRNA3P32297 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRNA3P32297 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.83■□□□□ 0.93
CHRNA3P32297 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.83■□□□□ 0.93
CHRNA3P32297 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.83■□□□□ 0.92
CHRNA3P32297 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHRNA3P32297 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHRNA3P32297 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHRNA3P32297 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHRNA3P32297 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHRNA3P32297 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHRNA3P32297 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CHRNA3P32297 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHRNA3P32297 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNA3P32297 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNA3P32297 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.82■□□□□ 0.92
CHRNA3P32297 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNA3P32297 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CHRNA3P32297 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNA3P32297 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CHRNA3P32297 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNA3P32297 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNA3P32297 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.82■□□□□ 0.92
CHRNA3P32297 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.82■□□□□ 0.92
CHRNA3P32297 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CHRNA3P32297 AC097658.1-201ENST00000475555 843 ntBASIC20.82■□□□□ 0.92
CHRNA3P32297 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.82■□□□□ 0.92
CHRNA3P32297 AC091874.3-201ENST00000512672 1195 ntBASIC20.82■□□□□ 0.92
CHRNA3P32297 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.82■□□□□ 0.92
CHRNA3P32297 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.82■□□□□ 0.92
CHRNA3P32297 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CHRNA3P32297 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.82■□□□□ 0.92
CHRNA3P32297 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CHRNA3P32297 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.82■□□□□ 0.92
CHRNA3P32297 KRT17P1-201ENST00000399211 1546 ntBASIC20.82■□□□□ 0.92
CHRNA3P32297 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNA3P32297 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNA3P32297 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNA3P32297 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CHRNA3P32297 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.82■□□□□ 0.92
CHRNA3P32297 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.82■□□□□ 0.92
CHRNA3P32297 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.81■□□□□ 0.92
CHRNA3P32297 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
CHRNA3P32297 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNA3P32297 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CHRNA3P32297 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNA3P32297 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNA3P32297 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNA3P32297 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNA3P32297 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.81■□□□□ 0.92
CHRNA3P32297 DUSP5P2-201ENST00000426873 1033 ntBASIC20.81■□□□□ 0.92
CHRNA3P32297 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.81■□□□□ 0.92
CHRNA3P32297 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.81■□□□□ 0.92
CHRNA3P32297 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.81■□□□□ 0.92
CHRNA3P32297 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CHRNA3P32297 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.81■□□□□ 0.92
CHRNA3P32297 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.81■□□□□ 0.92
CHRNA3P32297 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.81■□□□□ 0.92
CHRNA3P32297 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNA3P32297 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CHRNA3P32297 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNA3P32297 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CHRNA3P32297 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.81■□□□□ 0.92
CHRNA3P32297 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.81■□□□□ 0.92
CHRNA3P32297 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.81■□□□□ 0.92
CHRNA3P32297 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNA3P32297 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNA3P32297 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNA3P32297 AC093484.2-201ENST00000580996 2166 ntBASIC20.8■□□□□ 0.92
CHRNA3P32297 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.8■□□□□ 0.92
CHRNA3P32297 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms