Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBCP0CG48 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.34■□□□□ 0.37
UBCP0CG48 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBCP0CG48 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.34■□□□□ 0.37
UBCP0CG48 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBCP0CG48 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.34■□□□□ 0.37
UBCP0CG48 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
UBCP0CG48 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
UBCP0CG48 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBCP0CG48 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.34■□□□□ 0.37
UBCP0CG48 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBCP0CG48 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBCP0CG48 AC026471.1-201ENST00000564629 3026 ntBASIC17.34■□□□□ 0.37
UBCP0CG48 LETM1P2-201ENST00000597330 2178 ntBASIC17.34■□□□□ 0.37
UBCP0CG48 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
UBCP0CG48 AC105020.6-201ENST00000621523 1217 ntBASIC17.34■□□□□ 0.37
UBCP0CG48 AP001271.2-201ENST00000624018 1556 ntBASIC17.34■□□□□ 0.37
UBCP0CG48 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.34■□□□□ 0.37
UBCP0CG48 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBCP0CG48 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBCP0CG48 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBCP0CG48 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
UBCP0CG48 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
UBCP0CG48 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBCP0CG48 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UBCP0CG48 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
UBCP0CG48 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.33■□□□□ 0.37
UBCP0CG48 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBCP0CG48 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBCP0CG48 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.33■□□□□ 0.36
UBCP0CG48 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBCP0CG48 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBCP0CG48 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBCP0CG48 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBCP0CG48 AC137761.2-201ENST00000561729 223 ntBASIC17.33■□□□□ 0.36
UBCP0CG48 AC145350.3-201ENST00000569033 163 ntBASIC17.33■□□□□ 0.36
UBCP0CG48 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.33■□□□□ 0.36
UBCP0CG48 MFSD11-216ENST00000590393 1141 ntBASIC17.33■□□□□ 0.36
UBCP0CG48 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.33■□□□□ 0.36
UBCP0CG48 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBCP0CG48 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
UBCP0CG48 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBCP0CG48 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBCP0CG48 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBCP0CG48 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
UBCP0CG48 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
UBCP0CG48 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBCP0CG48 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
UBCP0CG48 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.32■□□□□ 0.36
UBCP0CG48 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.32■□□□□ 0.36
UBCP0CG48 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.32■□□□□ 0.36
UBCP0CG48 AC093484.2-201ENST00000580996 2166 ntBASIC17.32■□□□□ 0.36
UBCP0CG48 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBCP0CG48 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBCP0CG48 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBCP0CG48 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBCP0CG48 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBCP0CG48 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBCP0CG48 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBCP0CG48 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.32■□□□□ 0.36
UBCP0CG48 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.32■□□□□ 0.36
UBCP0CG48 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.32■□□□□ 0.36
UBCP0CG48 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
UBCP0CG48 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBCP0CG48 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBCP0CG48 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.32■□□□□ 0.36
UBCP0CG48 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBCP0CG48 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
UBCP0CG48 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.32■□□□□ 0.36
UBCP0CG48 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.32■□□□□ 0.36
UBCP0CG48 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.32■□□□□ 0.36
UBCP0CG48 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBCP0CG48 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
UBCP0CG48 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBCP0CG48 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBCP0CG48 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.31■□□□□ 0.36
UBCP0CG48 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBCP0CG48 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBCP0CG48 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBCP0CG48 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBCP0CG48 HLA-G-202ENST00000376815 851 ntBASIC17.31■□□□□ 0.36
UBCP0CG48 HLA-G-203ENST00000376818 1127 ntBASIC17.31■□□□□ 0.36
UBCP0CG48 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
UBCP0CG48 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.31■□□□□ 0.36
UBCP0CG48 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.31■□□□□ 0.36
UBCP0CG48 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.31■□□□□ 0.36
UBCP0CG48 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.31■□□□□ 0.36
UBCP0CG48 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBCP0CG48 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBCP0CG48 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBCP0CG48 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBCP0CG48 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBCP0CG48 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBCP0CG48 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBCP0CG48 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBCP0CG48 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBCP0CG48 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBCP0CG48 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBCP0CG48 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
UBCP0CG48 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms