Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
TNFP01375 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFP01375 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFP01375 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFP01375 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFP01375 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.38■□□□□ 0.69
TNFP01375 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFP01375 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.38■□□□□ 0.69
TNFP01375 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.38■□□□□ 0.69
TNFP01375 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFP01375 AC211429.1-201ENST00000415277 523 ntBASIC19.38■□□□□ 0.69
TNFP01375 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.38■□□□□ 0.69
TNFP01375 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.38■□□□□ 0.69
TNFP01375 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.38■□□□□ 0.69
TNFP01375 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFP01375 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.38■□□□□ 0.69
TNFP01375 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFP01375 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.38■□□□□ 0.69
TNFP01375 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.38■□□□□ 0.69
TNFP01375 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFP01375 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFP01375 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.38■□□□□ 0.69
TNFP01375 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFP01375 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNFP01375 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFP01375 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TNFP01375 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TNFP01375 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.37■□□□□ 0.69
TNFP01375 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TNFP01375 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNFP01375 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNFP01375 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.37■□□□□ 0.69
TNFP01375 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFP01375 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNFP01375 YBX1P10-201ENST00000444752 975 ntBASIC19.37■□□□□ 0.69
TNFP01375 KSR1P1-201ENST00000446298 240 ntBASIC19.37■□□□□ 0.69
TNFP01375 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.37■□□□□ 0.69
TNFP01375 TSPY15P-201ENST00000457163 923 ntBASIC19.37■□□□□ 0.69
TNFP01375 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFP01375 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFP01375 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.37■□□□□ 0.69
TNFP01375 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFP01375 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.37■□□□□ 0.69
TNFP01375 CR392000.1-201ENST00000624770 1228 ntBASIC19.37■□□□□ 0.69
TNFP01375 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFP01375 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFP01375 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFP01375 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TNFP01375 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
TNFP01375 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TNFP01375 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TNFP01375 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFP01375 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.36■□□□□ 0.69
TNFP01375 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TNFP01375 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.36■□□□□ 0.69
TNFP01375 ECEL1P3-201ENST00000427961 737 ntBASIC19.36■□□□□ 0.69
TNFP01375 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TNFP01375 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.36■□□□□ 0.69
TNFP01375 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.36■□□□□ 0.69
TNFP01375 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
TNFP01375 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.36■□□□□ 0.69
TNFP01375 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.36■□□□□ 0.69
TNFP01375 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.36■□□□□ 0.69
TNFP01375 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFP01375 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFP01375 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFP01375 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFP01375 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TNFP01375 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFP01375 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFP01375 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFP01375 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFP01375 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
TNFP01375 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFP01375 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFP01375 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFP01375 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.35■□□□□ 0.69
TNFP01375 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFP01375 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.35■□□□□ 0.69
TNFP01375 NIFKP9-201ENST00000419265 221 ntBASIC19.35■□□□□ 0.69
TNFP01375 TUBB8P6-201ENST00000436895 1288 ntBASIC19.35■□□□□ 0.69
TNFP01375 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.35■□□□□ 0.69
TNFP01375 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.35■□□□□ 0.69
TNFP01375 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
TNFP01375 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.35■□□□□ 0.69
TNFP01375 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TNFP01375 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFP01375 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFP01375 AC020907.5-201ENST00000624372 1936 ntBASIC19.35■□□□□ 0.69
TNFP01375 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFP01375 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TNFP01375 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TNFP01375 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
TNFP01375 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.34■□□□□ 0.69
TNFP01375 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
TNFP01375 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFP01375 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.34■□□□□ 0.69
TNFP01375 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TNFP01375 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFP01375 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms