Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE3O43900 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE3O43900 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PRICKLE3O43900 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE3O43900 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE3O43900 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.05■□□□□ 0.64
PRICKLE3O43900 GCSHP5-201ENST00000443090 522 ntBASIC19.05■□□□□ 0.64
PRICKLE3O43900 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.05■□□□□ 0.64
PRICKLE3O43900 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.05■□□□□ 0.64
PRICKLE3O43900 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.05■□□□□ 0.64
PRICKLE3O43900 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
PRICKLE3O43900 RPPH1-201ENST00000516869 333 ntBASIC19.05■□□□□ 0.64
PRICKLE3O43900 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PRICKLE3O43900 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.05■□□□□ 0.64
PRICKLE3O43900 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.05■□□□□ 0.64
PRICKLE3O43900 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PRICKLE3O43900 AC124016.1-201ENST00000609552 612 ntBASIC19.05■□□□□ 0.64
PRICKLE3O43900 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE3O43900 AL359736.2-201ENST00000621992 437 ntBASIC19.05■□□□□ 0.64
PRICKLE3O43900 AL023875.1-201ENST00000640777 796 ntBASIC19.05■□□□□ 0.64
PRICKLE3O43900 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.05■□□□□ 0.64
PRICKLE3O43900 AC112907.3-201ENST00000577781 2400 ntBASIC19.05■□□□□ 0.64
PRICKLE3O43900 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE3O43900 AP001271.2-201ENST00000624018 1556 ntBASIC19.05■□□□□ 0.64
PRICKLE3O43900 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PRICKLE3O43900 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE3O43900 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
PRICKLE3O43900 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PRICKLE3O43900 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
PRICKLE3O43900 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRICKLE3O43900 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRICKLE3O43900 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRICKLE3O43900 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRICKLE3O43900 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PRICKLE3O43900 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRICKLE3O43900 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.04■□□□□ 0.64
PRICKLE3O43900 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PRICKLE3O43900 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.04■□□□□ 0.64
PRICKLE3O43900 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.04■□□□□ 0.64
PRICKLE3O43900 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.04■□□□□ 0.64
PRICKLE3O43900 AC009237.14-201ENST00000609975 1594 ntBASIC19.04■□□□□ 0.64
PRICKLE3O43900 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PRICKLE3O43900 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.04■□□□□ 0.64
PRICKLE3O43900 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
PRICKLE3O43900 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
PRICKLE3O43900 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRICKLE3O43900 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.04■□□□□ 0.64
PRICKLE3O43900 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRICKLE3O43900 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.04■□□□□ 0.64
PRICKLE3O43900 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.03■□□□□ 0.64
PRICKLE3O43900 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE3O43900 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE3O43900 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.03■□□□□ 0.64
PRICKLE3O43900 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PRICKLE3O43900 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.03■□□□□ 0.64
PRICKLE3O43900 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE3O43900 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE3O43900 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.03■□□□□ 0.64
PRICKLE3O43900 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE3O43900 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.03■□□□□ 0.64
PRICKLE3O43900 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.03■□□□□ 0.64
PRICKLE3O43900 C1QBPP2-201ENST00000528754 825 ntBASIC19.03■□□□□ 0.64
PRICKLE3O43900 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE3O43900 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE3O43900 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE3O43900 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE3O43900 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE3O43900 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE3O43900 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE3O43900 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.03■□□□□ 0.64
PRICKLE3O43900 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRICKLE3O43900 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRICKLE3O43900 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.02■□□□□ 0.64
PRICKLE3O43900 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRICKLE3O43900 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRICKLE3O43900 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.02■□□□□ 0.64
PRICKLE3O43900 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRICKLE3O43900 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.02■□□□□ 0.64
PRICKLE3O43900 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.02■□□□□ 0.64
PRICKLE3O43900 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PRICKLE3O43900 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRICKLE3O43900 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRICKLE3O43900 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRICKLE3O43900 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRICKLE3O43900 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRICKLE3O43900 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.02■□□□□ 0.64
PRICKLE3O43900 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.02■□□□□ 0.64
PRICKLE3O43900 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.02■□□□□ 0.64
PRICKLE3O43900 PRKY-204ENST00000533551 1019 ntBASIC19.02■□□□□ 0.64
PRICKLE3O43900 AC142381.4-202ENST00000563973 229 ntBASIC19.02■□□□□ 0.64
PRICKLE3O43900 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PRICKLE3O43900 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.02■□□□□ 0.64
PRICKLE3O43900 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.02■□□□□ 0.64
PRICKLE3O43900 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRICKLE3O43900 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRICKLE3O43900 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRICKLE3O43900 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
PRICKLE3O43900 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRICKLE3O43900 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE3O43900 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms