Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNRC18O15417 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNRC18O15417 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNRC18O15417 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.77■■□□□ 1.08
TNRC18O15417 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNRC18O15417 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.77■■□□□ 1.08
TNRC18O15417 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.77■■□□□ 1.08
TNRC18O15417 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.77■■□□□ 1.08
TNRC18O15417 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.77■■□□□ 1.08
TNRC18O15417 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.77■■□□□ 1.08
TNRC18O15417 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.77■■□□□ 1.08
TNRC18O15417 LINC01124-201ENST00000409786 2117 ntBASIC21.77■■□□□ 1.08
TNRC18O15417 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNRC18O15417 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNRC18O15417 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TNRC18O15417 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TNRC18O15417 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TNRC18O15417 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TNRC18O15417 HLA-G-202ENST00000376815 851 ntBASIC21.76■■□□□ 1.07
TNRC18O15417 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.76■■□□□ 1.07
TNRC18O15417 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.76■■□□□ 1.07
TNRC18O15417 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.76■■□□□ 1.07
TNRC18O15417 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TNRC18O15417 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
TNRC18O15417 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
TNRC18O15417 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TNRC18O15417 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.76■■□□□ 1.07
TNRC18O15417 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.76■■□□□ 1.07
TNRC18O15417 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.76■■□□□ 1.07
TNRC18O15417 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.76■■□□□ 1.07
TNRC18O15417 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TNRC18O15417 TPSP2-201ENST00000561760 610 ntBASIC21.76■■□□□ 1.07
TNRC18O15417 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TNRC18O15417 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TNRC18O15417 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TNRC18O15417 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.76■■□□□ 1.07
TNRC18O15417 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21.75■■□□□ 1.07
TNRC18O15417 AC112497.1-201ENST00000624824 639 ntBASIC21.75■■□□□ 1.07
TNRC18O15417 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TNRC18O15417 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TNRC18O15417 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TNRC18O15417 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TNRC18O15417 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TNRC18O15417 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TNRC18O15417 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TNRC18O15417 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.75■■□□□ 1.07
TNRC18O15417 AC091304.2-201ENST00000564639 760 ntBASIC21.75■■□□□ 1.07
TNRC18O15417 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.75■■□□□ 1.07
TNRC18O15417 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.75■■□□□ 1.07
TNRC18O15417 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TNRC18O15417 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TNRC18O15417 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TNRC18O15417 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.75■■□□□ 1.07
TNRC18O15417 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.75■■□□□ 1.07
TNRC18O15417 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.75■■□□□ 1.07
TNRC18O15417 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.75■■□□□ 1.07
TNRC18O15417 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.75■■□□□ 1.07
TNRC18O15417 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TNRC18O15417 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TNRC18O15417 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.74■■□□□ 1.07
TNRC18O15417 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.74■■□□□ 1.07
TNRC18O15417 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TNRC18O15417 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TNRC18O15417 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
TNRC18O15417 AL390719.2-201ENST00000606993 987 ntBASIC21.74■■□□□ 1.07
TNRC18O15417 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.74■■□□□ 1.07
TNRC18O15417 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TNRC18O15417 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.74■■□□□ 1.07
TNRC18O15417 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TNRC18O15417 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.74■■□□□ 1.07
TNRC18O15417 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.74■■□□□ 1.07
TNRC18O15417 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TNRC18O15417 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.74■■□□□ 1.07
TNRC18O15417 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TNRC18O15417 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.73■■□□□ 1.07
TNRC18O15417 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TNRC18O15417 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TNRC18O15417 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.73■■□□□ 1.07
TNRC18O15417 BX276092.5-203ENST00000456199 560 ntBASIC21.73■■□□□ 1.07
TNRC18O15417 AP003041.3-201ENST00000527151 707 ntBASIC21.73■■□□□ 1.07
TNRC18O15417 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TNRC18O15417 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TNRC18O15417 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TNRC18O15417 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TNRC18O15417 PMS2P7-201ENST00000506558 1336 ntBASIC21.73■■□□□ 1.07
TNRC18O15417 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TNRC18O15417 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.73■■□□□ 1.07
TNRC18O15417 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.73■■□□□ 1.07
TNRC18O15417 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.73■■□□□ 1.07
TNRC18O15417 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TNRC18O15417 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.72■■□□□ 1.07
TNRC18O15417 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNRC18O15417 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.72■■□□□ 1.07
TNRC18O15417 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.72■■□□□ 1.07
TNRC18O15417 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNRC18O15417 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TNRC18O15417 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TNRC18O15417 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.72■■□□□ 1.07
TNRC18O15417 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.72■■□□□ 1.07
TNRC18O15417 PGAM5P1-201ENST00000518923 814 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms