Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
HFM1A2PYH4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
HFM1A2PYH4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
HFM1A2PYH4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC29.43■■■□□ 2.3
HFM1A2PYH4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC29.43■■■□□ 2.3
HFM1A2PYH4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC29.43■■■□□ 2.3
HFM1A2PYH4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
HFM1A2PYH4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC29.42■■■□□ 2.3
HFM1A2PYH4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
HFM1A2PYH4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC29.42■■■□□ 2.3
HFM1A2PYH4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC29.42■■■□□ 2.3
HFM1A2PYH4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC29.42■■■□□ 2.3
HFM1A2PYH4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC29.42■■■□□ 2.3
HFM1A2PYH4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
HFM1A2PYH4 TMEM179-206ENST00000616017 1645 ntBASIC29.42■■■□□ 2.3
HFM1A2PYH4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
HFM1A2PYH4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
HFM1A2PYH4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
HFM1A2PYH4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
HFM1A2PYH4 PENK-204ENST00000518770 863 ntTSL 2 BASIC29.42■■■□□ 2.3
HFM1A2PYH4 AL391422.3-201ENST00000603791 2761 ntBASIC29.42■■■□□ 2.3
HFM1A2PYH4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC29.42■■■□□ 2.3
HFM1A2PYH4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
HFM1A2PYH4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC29.41■■■□□ 2.3
HFM1A2PYH4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC29.41■■■□□ 2.3
HFM1A2PYH4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
HFM1A2PYH4 LINC01521-201ENST00000504184 1943 ntBASIC29.41■■■□□ 2.3
HFM1A2PYH4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC29.41■■■□□ 2.3
HFM1A2PYH4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
HFM1A2PYH4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
HFM1A2PYH4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC29.41■■■□□ 2.3
HFM1A2PYH4 TSPY7P-201ENST00000431358 1114 ntBASIC29.41■■■□□ 2.3
HFM1A2PYH4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC29.41■■■□□ 2.3
HFM1A2PYH4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC29.41■■■□□ 2.3
HFM1A2PYH4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC29.41■■■□□ 2.3
HFM1A2PYH4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC29.41■■■□□ 2.3
HFM1A2PYH4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
HFM1A2PYH4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
HFM1A2PYH4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
HFM1A2PYH4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC29.41■■■□□ 2.3
HFM1A2PYH4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC29.41■■■□□ 2.3
HFM1A2PYH4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
HFM1A2PYH4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC29.4■■■□□ 2.3
HFM1A2PYH4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC29.4■■■□□ 2.3
HFM1A2PYH4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
HFM1A2PYH4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
HFM1A2PYH4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
HFM1A2PYH4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC29.4■■■□□ 2.3
HFM1A2PYH4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC29.4■■■□□ 2.3
HFM1A2PYH4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
HFM1A2PYH4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
HFM1A2PYH4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC29.4■■■□□ 2.3
HFM1A2PYH4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC29.4■■■□□ 2.3
HFM1A2PYH4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
HFM1A2PYH4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
HFM1A2PYH4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
HFM1A2PYH4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC29.4■■■□□ 2.3
HFM1A2PYH4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
HFM1A2PYH4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC29.39■■■□□ 2.3
HFM1A2PYH4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
HFM1A2PYH4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
HFM1A2PYH4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC29.39■■■□□ 2.3
HFM1A2PYH4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC29.39■■■□□ 2.3
HFM1A2PYH4 SAPCD2P4-201ENST00000424595 1171 ntBASIC29.39■■■□□ 2.3
HFM1A2PYH4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
HFM1A2PYH4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC29.39■■■□□ 2.3
HFM1A2PYH4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
HFM1A2PYH4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
HFM1A2PYH4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
HFM1A2PYH4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.29
HFM1A2PYH4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
HFM1A2PYH4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
HFM1A2PYH4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
HFM1A2PYH4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
HFM1A2PYH4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
HFM1A2PYH4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
HFM1A2PYH4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC29.38■■■□□ 2.29
HFM1A2PYH4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC29.38■■■□□ 2.29
HFM1A2PYH4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
HFM1A2PYH4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
HFM1A2PYH4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
HFM1A2PYH4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC29.37■■■□□ 2.29
HFM1A2PYH4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
HFM1A2PYH4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC29.37■■■□□ 2.29
HFM1A2PYH4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC29.37■■■□□ 2.29
HFM1A2PYH4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
HFM1A2PYH4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC29.37■■■□□ 2.29
HFM1A2PYH4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
HFM1A2PYH4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC29.37■■■□□ 2.29
HFM1A2PYH4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC29.37■■■□□ 2.29
HFM1A2PYH4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
HFM1A2PYH4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
HFM1A2PYH4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
HFM1A2PYH4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
HFM1A2PYH4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
HFM1A2PYH4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC29.36■■■□□ 2.29
HFM1A2PYH4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC29.36■■■□□ 2.29
HFM1A2PYH4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC29.36■■■□□ 2.29
HFM1A2PYH4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC29.36■■■□□ 2.29
HFM1A2PYH4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC29.36■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms