Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 RNU1-32P-201ENST00000363937 159 ntBASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 AL096829.1-201ENST00000413677 457 ntBASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 AC239367.2-201ENST00000447309 705 ntBASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 CREM-230ENST00000474931 626 ntTSL 2 BASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 SLC25A15P5-201ENST00000508033 253 ntBASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 MAPK10-350ENST00000641777 965 ntBASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 AC007998.4-201ENST00000612496 2533 ntBASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 AC023245.1-201ENST00000468501 517 ntBASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 IGHVIII-47-1-201ENST00000518187 331 ntBASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 SS18L2P2-201ENST00000583960 235 ntBASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 AP002799.1-201ENST00000623552 423 ntBASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
RIMBP3Q9UFD9 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
RIMBP3Q9UFD9 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC9.65□□□□□ -0.87
RIMBP3Q9UFD9 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.87
RIMBP3Q9UFD9 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
RIMBP3Q9UFD9 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
RIMBP3Q9UFD9 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC9.65□□□□□ -0.87
RIMBP3Q9UFD9 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.87
RIMBP3Q9UFD9 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
RIMBP3Q9UFD9 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
RIMBP3Q9UFD9 AC114786.1-201ENST00000512892 1415 ntBASIC9.65□□□□□ -0.87
RIMBP3Q9UFD9 HSPA8P18-201ENST00000439846 1928 ntBASIC9.65□□□□□ -0.87
RIMBP3Q9UFD9 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 RPS27AP6-201ENST00000427962 448 ntBASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 RBMY2QP-201ENST00000429799 1147 ntBASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 AC245047.1-201ENST00000433276 873 ntBASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 MRPS16P1-201ENST00000523462 412 ntBASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 AL133406.3-201ENST00000606817 541 ntBASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 OR9K1P-202ENST00000641111 3217 ntBASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 RN7SKP113-201ENST00000363891 295 ntBASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 MIR192-201ENST00000384915 110 ntBASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 HNRNPDLP2-201ENST00000455248 751 ntBASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 OARD1-211ENST00000480585 829 ntTSL 3 BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 IGBP1P5-201ENST00000507524 1000 ntBASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 AC106800.3-201ENST00000511389 308 ntBASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 AC110056.1-201ENST00000525759 911 ntBASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 AC092865.1-201ENST00000544395 1023 ntBASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 AP000919.1-201ENST00000582850 985 ntBASIC9.64□□□□□ -0.87
RIMBP3Q9UFD9 NUDCD2-201ENST00000302764 8005 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
RIMBP3Q9UFD9 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
RIMBP3Q9UFD9 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
RIMBP3Q9UFD9 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
RIMBP3Q9UFD9 SRRM1P3-201ENST00000426911 2678 ntBASIC9.63□□□□□ -0.87
RIMBP3Q9UFD9 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
RIMBP3Q9UFD9 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
RIMBP3Q9UFD9 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
RIMBP3Q9UFD9 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC9.63□□□□□ -0.87
RIMBP3Q9UFD9 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
RIMBP3Q9UFD9 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
RIMBP3Q9UFD9 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC9.63□□□□□ -0.87
RIMBP3Q9UFD9 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
RIMBP3Q9UFD9 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
RIMBP3Q9UFD9 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms