Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 AP003108.4-201ENST00000623917 878 ntBASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 AL049541.2-201ENST00000626377 555 ntBASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 AC122713.2-201ENST00000624942 3335 ntBASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.01□□□□□ -1.29
TRIM39Q9HCM9 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 OR4C1P-202ENST00000641065 1569 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 AC011815.2-201ENST00000618230 2021 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM39Q9HCM9 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM39Q9HCM9 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 CR788268.1-201ENST00000603931 1809 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM39Q9HCM9 RNU6-481P-201ENST00000384194 107 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 AP002530.1-201ENST00000405705 684 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 RN7SKP137-201ENST00000411074 307 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 RPL26P37-201ENST00000411983 438 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 NANOGP5-201ENST00000424456 877 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRIM39Q9HCM9 MTCYBP31-201ENST00000438855 1122 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 Z77249.1-201ENST00000444622 1175 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 AL358794.1-201ENST00000445689 381 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 GAPDHP53-201ENST00000458397 924 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 RN7SL518P-201ENST00000491887 280 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 ASNSP4-201ENST00000511103 447 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 DCAF13P2-201ENST00000514188 555 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 RNU6-311P-201ENST00000516224 102 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 DUXAP5-201ENST00000529668 529 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 SETP17-201ENST00000534163 817 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 WDR45BP1-201ENST00000583470 1029 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 MTCO2P22-201ENST00000603246 681 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 AC084373.1-201ENST00000603311 235 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 AL161420.1-201ENST00000619393 264 ntBASIC7□□□□□ -1.29
TRIM39Q9HCM9 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 ASB8-218ENST00000629941 278 ntTSL 5 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM39Q9HCM9 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRIM39Q9HCM9 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM39Q9HCM9 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM39Q9HCM9 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRIM39Q9HCM9 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM39Q9HCM9 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRIM39Q9HCM9 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
TRIM39Q9HCM9 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
TRIM39Q9HCM9 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
TRIM39Q9HCM9 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM39Q9HCM9 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM39Q9HCM9 ICE2P1-201ENST00000512800 1849 ntBASIC6.99□□□□□ -1.29
TRIM39Q9HCM9 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM39Q9HCM9 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM39Q9HCM9 HSPD1P11-201ENST00000508643 1702 ntBASIC6.99□□□□□ -1.29
TRIM39Q9HCM9 OR5M2P-202ENST00000641241 4242 ntBASIC6.99□□□□□ -1.29
TRIM39Q9HCM9 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
TRIM39Q9HCM9 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM39Q9HCM9 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM39Q9HCM9 CDY7P-201ENST00000429883 1604 ntBASIC6.99□□□□□ -1.29
TRIM39Q9HCM9 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM39Q9HCM9 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM39Q9HCM9 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms