Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
SIN3AQ96ST3 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SIN3AQ96ST3 TMCC1P1-201ENST00000518897 1980 ntBASIC9.02□□□□□ -0.97
SIN3AQ96ST3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.97
SIN3AQ96ST3 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SIN3AQ96ST3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SIN3AQ96ST3 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
SIN3AQ96ST3 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 ODF3-202ENST00000342593 386 ntTSL 5 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 RBBP4P5-201ENST00000398583 1266 ntBASIC9.01□□□□□ -0.97
SIN3AQ96ST3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 RNA5SP431-201ENST00000410312 120 ntBASIC9.01□□□□□ -0.97
SIN3AQ96ST3 ALDH7A1P4-201ENST00000412255 178 ntBASIC9.01□□□□□ -0.97
SIN3AQ96ST3 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 PSMD10P2-201ENST00000432890 672 ntBASIC9.01□□□□□ -0.97
SIN3AQ96ST3 AL512593.1-201ENST00000444758 779 ntBASIC9.01□□□□□ -0.97
SIN3AQ96ST3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 AL022319.1-201ENST00000458183 1167 ntBASIC9.01□□□□□ -0.97
SIN3AQ96ST3 RN7SL741P-201ENST00000482473 289 ntBASIC9.01□□□□□ -0.97
SIN3AQ96ST3 RPL37P23-201ENST00000492641 294 ntBASIC9.01□□□□□ -0.97
SIN3AQ96ST3 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 NATP-201ENST00000523491 878 ntBASIC9.01□□□□□ -0.97
SIN3AQ96ST3 NPIPB14P-203ENST00000532298 987 ntBASIC9.01□□□□□ -0.97
SIN3AQ96ST3 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 HSPD1P4-201ENST00000547203 1702 ntBASIC9.01□□□□□ -0.97
SIN3AQ96ST3 MYL2-203ENST00000548438 664 ntTSL 3 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 MIR6806-201ENST00000622141 64 ntBASIC9.01□□□□□ -0.97
SIN3AQ96ST3 Z82209.2-201ENST00000623410 2012 ntBASIC9.01□□□□□ -0.97
SIN3AQ96ST3 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 TEX41-271ENST00000628213 993 ntTSL 5 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 AL357140.4-201ENST00000636827 412 ntBASIC9.01□□□□□ -0.97
SIN3AQ96ST3 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 AC092692.1-201ENST00000623625 2595 ntBASIC9.01□□□□□ -0.97
SIN3AQ96ST3 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC9.01□□□□□ -0.97
SIN3AQ96ST3 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC9□□□□□ -0.97
SIN3AQ96ST3 AC022325.1-201ENST00000502748 2199 ntBASIC9□□□□□ -0.97
SIN3AQ96ST3 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC9□□□□□ -0.97
SIN3AQ96ST3 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
SIN3AQ96ST3 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
SIN3AQ96ST3 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC9□□□□□ -0.97
SIN3AQ96ST3 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
SIN3AQ96ST3 AC011416.1-201ENST00000514947 1732 ntBASIC9□□□□□ -0.97
SIN3AQ96ST3 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SIN3AQ96ST3 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
SIN3AQ96ST3 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
SIN3AQ96ST3 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC9□□□□□ -0.97
SIN3AQ96ST3 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
SIN3AQ96ST3 RNU1-65P-201ENST00000363919 148 ntBASIC9□□□□□ -0.97
SIN3AQ96ST3 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
SIN3AQ96ST3 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SIN3AQ96ST3 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC9□□□□□ -0.97
SIN3AQ96ST3 AC007562.1-201ENST00000421819 517 ntBASIC9□□□□□ -0.97
SIN3AQ96ST3 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC9□□□□□ -0.97
SIN3AQ96ST3 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC9□□□□□ -0.97
SIN3AQ96ST3 AC023274.2-201ENST00000445264 521 ntBASIC9□□□□□ -0.97
SIN3AQ96ST3 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC9□□□□□ -0.97
SIN3AQ96ST3 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC9□□□□□ -0.97
SIN3AQ96ST3 IGKV3D-25-201ENST00000519599 235 ntBASIC9□□□□□ -0.97
SIN3AQ96ST3 AC024405.1-201ENST00000532521 1042 ntBASIC9□□□□□ -0.97
SIN3AQ96ST3 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC9□□□□□ -0.97
SIN3AQ96ST3 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC9□□□□□ -0.97
SIN3AQ96ST3 APOC2-205ENST00000592257 444 ntTSL 3 BASIC9□□□□□ -0.97
SIN3AQ96ST3 RFPL4AP6-201ENST00000616792 846 ntBASIC9□□□□□ -0.97
SIN3AQ96ST3 OXSM-209ENST00000626005 309 ntTSL 3 BASIC9□□□□□ -0.97
SIN3AQ96ST3 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SIN3AQ96ST3 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SIN3AQ96ST3 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC9□□□□□ -0.97
SIN3AQ96ST3 AL121768.1-201ENST00000613917 2544 ntBASIC9□□□□□ -0.97
SIN3AQ96ST3 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC9□□□□□ -0.97
SIN3AQ96ST3 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC9□□□□□ -0.97
SIN3AQ96ST3 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SIN3AQ96ST3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC8.99□□□□□ -0.97
SIN3AQ96ST3 FO393409.1-201ENST00000399325 1372 ntBASIC8.99□□□□□ -0.97
SIN3AQ96ST3 AL354854.1-201ENST00000455940 1363 ntBASIC8.99□□□□□ -0.97
SIN3AQ96ST3 EEF1A1P9-201ENST00000514975 1383 ntBASIC8.99□□□□□ -0.97
SIN3AQ96ST3 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SIN3AQ96ST3 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC8.99□□□□□ -0.97
SIN3AQ96ST3 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
SIN3AQ96ST3 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms