Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC8.5□□□□□ -1.05
HLA-CQ95604 AC034232.2-201ENST00000511579 917 ntTSL 2 BASIC8.5□□□□□ -1.05
HLA-CQ95604 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC8.5□□□□□ -1.05
HLA-CQ95604 AC008802.1-201ENST00000519121 791 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-CQ95604 AC009729.1-201ENST00000548873 1133 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC8.5□□□□□ -1.05
HLA-CQ95604 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC8.5□□□□□ -1.05
HLA-CQ95604 AC138869.3-201ENST00000563960 2486 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-CQ95604 ULK4P2-202ENST00000564187 492 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC8.5□□□□□ -1.05
HLA-CQ95604 AC125421.2-201ENST00000580370 583 ntTSL 4 BASIC8.5□□□□□ -1.05
HLA-CQ95604 MIR548AB-201ENST00000584917 84 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 AC010928.3-201ENST00000587712 541 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC8.5□□□□□ -1.05
HLA-CQ95604 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC8.5□□□□□ -1.05
HLA-CQ95604 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC8.5□□□□□ -1.05
HLA-CQ95604 AC020908.2-201ENST00000595134 405 ntTSL 2 BASIC8.5□□□□□ -1.05
HLA-CQ95604 AL390838.2-201ENST00000602394 274 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 AC233280.2-201ENST00000603917 1070 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 AC023513.1-201ENST00000604396 691 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 FAM27E3-202ENST00000614611 340 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 pRNA.9-201ENST00000618609 89 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 AL353583.1-201ENST00000624195 1855 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-CQ95604 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-CQ95604 OGDH-206ENST00000447398 3474 ntTSL 5 BASIC8.5□□□□□ -1.05
HLA-CQ95604 TGIF2-208ENST00000611732 3344 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
HLA-CQ95604 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC8.5□□□□□ -1.05
HLA-CQ95604 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
HLA-CQ95604 AC117409.1-201ENST00000470499 1310 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.5□□□□□ -1.05
HLA-CQ95604 RAB36-201ENST00000263116 3828 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-CQ95604 PAPD4-204ENST00000453514 3523 ntAPPRIS P3 TSL 5 BASIC8.5□□□□□ -1.05
HLA-CQ95604 ETV1-206ENST00000405218 3391 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
HLA-CQ95604 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC8.5□□□□□ -1.05
HLA-CQ95604 ARMC8-215ENST00000471453 2910 ntTSL 2 BASIC8.5□□□□□ -1.05
HLA-CQ95604 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
HLA-CQ95604 DAB2-201ENST00000320816 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-CQ95604 AC009021.2-201ENST00000567401 1666 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-CQ95604 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.49□□□□□ -1.05
HLA-CQ95604 AC022507.1-201ENST00000548349 1505 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-CQ95604 TKTL2-201ENST00000280605 2654 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
HLA-CQ95604 GLE1-201ENST00000309971 3321 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-CQ95604 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-CQ95604 SWT1-202ENST00000367501 3001 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
HLA-CQ95604 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-CQ95604 MAP3K7CL-202ENST00000339024 2066 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
HLA-CQ95604 MAP3K7CL-208ENST00000399935 2093 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
HLA-CQ95604 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
HLA-CQ95604 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-CQ95604 AC020549.1-201ENST00000536916 1440 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.49□□□□□ -1.05
HLA-CQ95604 NLGN4X-208ENST00000538097 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-CQ95604 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
HLA-CQ95604 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
HLA-CQ95604 GNL3L-202ENST00000360845 2135 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
HLA-CQ95604 RNU6-374P-201ENST00000364146 108 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 Y_RNA.326-201ENST00000365176 113 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-CQ95604 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
HLA-CQ95604 AL109918.1-202ENST00000406724 436 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC8.49□□□□□ -1.05
HLA-CQ95604 AP000357.1-201ENST00000409926 1165 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 AC010385.1-201ENST00000412374 256 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 FO393419.3-201ENST00000428741 282 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC8.49□□□□□ -1.05
HLA-CQ95604 PA2G4P6-201ENST00000438325 1197 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC8.49□□□□□ -1.05
HLA-CQ95604 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC8.49□□□□□ -1.05
HLA-CQ95604 OR7E125P-201ENST00000443450 846 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 NIPA2P5-201ENST00000452282 464 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 AL135908.1-202ENST00000454135 562 ntTSL 2 BASIC8.49□□□□□ -1.05
HLA-CQ95604 OR6K1P-201ENST00000456766 971 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC8.49□□□□□ -1.05
HLA-CQ95604 AC090013.1-201ENST00000485147 480 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC8.49□□□□□ -1.05
HLA-CQ95604 AC092349.1-201ENST00000504903 310 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC8.49□□□□□ -1.05
HLA-CQ95604 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC8.49□□□□□ -1.05
HLA-CQ95604 NPIPB14P-203ENST00000532298 987 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-CQ95604 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC8.49□□□□□ -1.05
HLA-CQ95604 SMARCE1P3-201ENST00000553649 1231 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 AL117190.2-201ENST00000554041 289 ntTSL 2 BASIC8.49□□□□□ -1.05
HLA-CQ95604 COX6CP11-201ENST00000555293 229 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC8.49□□□□□ -1.05
HLA-CQ95604 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC8.49□□□□□ -1.05
HLA-CQ95604 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC8.49□□□□□ -1.05
HLA-CQ95604 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC8.49□□□□□ -1.05
HLA-CQ95604 OR7E19P-202ENST00000589942 844 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC8.49□□□□□ -1.05
HLA-CQ95604 OR7E94P-202ENST00000601375 790 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 AC103710.1-201ENST00000610003 901 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC8.49□□□□□ -1.05
HLA-CQ95604 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
HLA-CQ95604 SLC22A24-203ENST00000612278 2101 ntAPPRIS P2 TSL 5 BASIC8.49□□□□□ -1.05
HLA-CQ95604 OR8G7P-201ENST00000616658 848 ntBASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms