Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.61□□□□□ -1.35
HMGB4Q8WW32 NDUFA5P1-201ENST00000433858 341 ntBASIC6.61□□□□□ -1.35
HMGB4Q8WW32 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB4Q8WW32 OR2L9P-201ENST00000444456 913 ntBASIC6.61□□□□□ -1.35
HMGB4Q8WW32 AC094085.1-201ENST00000468914 584 ntBASIC6.61□□□□□ -1.35
HMGB4Q8WW32 H3F3AP3-201ENST00000497682 407 ntBASIC6.61□□□□□ -1.35
HMGB4Q8WW32 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.61□□□□□ -1.35
HMGB4Q8WW32 ZNF519P4-201ENST00000514008 125 ntBASIC6.61□□□□□ -1.35
HMGB4Q8WW32 TRIM51DP-201ENST00000529746 596 ntBASIC6.61□□□□□ -1.35
HMGB4Q8WW32 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.61□□□□□ -1.35
HMGB4Q8WW32 AC016144.1-201ENST00000548175 1087 ntBASIC6.61□□□□□ -1.35
HMGB4Q8WW32 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB4Q8WW32 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB4Q8WW32 AC002519.2-203ENST00000567043 837 ntBASIC6.61□□□□□ -1.35
HMGB4Q8WW32 GLYATL1P2-202ENST00000588046 902 ntBASIC6.61□□□□□ -1.35
HMGB4Q8WW32 RPSAP75-201ENST00000605848 301 ntBASIC6.61□□□□□ -1.35
HMGB4Q8WW32 AC008833.1-201ENST00000611633 691 ntBASIC6.61□□□□□ -1.35
HMGB4Q8WW32 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.61□□□□□ -1.35
HMGB4Q8WW32 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.61□□□□□ -1.35
HMGB4Q8WW32 MIR6811-201ENST00000620409 58 ntBASIC6.61□□□□□ -1.35
HMGB4Q8WW32 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.61□□□□□ -1.35
HMGB4Q8WW32 AC020763.5-201ENST00000623298 430 ntBASIC6.61□□□□□ -1.35
HMGB4Q8WW32 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
HMGB4Q8WW32 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.61□□□□□ -1.35
HMGB4Q8WW32 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
HMGB4Q8WW32 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.61□□□□□ -1.35
HMGB4Q8WW32 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGB4Q8WW32 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB4Q8WW32 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGB4Q8WW32 CASC19-246ENST00000641625 1606 ntBASIC6.61□□□□□ -1.35
HMGB4Q8WW32 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGB4Q8WW32 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGB4Q8WW32 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB4Q8WW32 AC010329.1-201ENST00000593903 8328 ntBASIC6.61□□□□□ -1.35
HMGB4Q8WW32 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AC104966.1-201ENST00000467010 1464 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AC005839.1-201ENST00000624148 3213 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 OR2AH1P-202ENST00000641232 2744 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AC008171.1-201ENST00000395058 200 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AL035422.1-201ENST00000414193 397 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 MTND4LP21-201ENST00000415303 295 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AC002127.1-201ENST00000421305 225 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AC245047.1-201ENST00000433276 873 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 CRYGGP-201ENST00000443337 145 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 RPL5P7-201ENST00000444235 813 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AC026826.1-201ENST00000493002 361 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 ATG10-AS1-201ENST00000504846 648 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AC011352.2-201ENST00000514574 1016 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 SCARNA5-201ENST00000516201 276 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AC009879.1-201ENST00000520029 839 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AL133399.1-201ENST00000527476 298 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AP004609.2-201ENST00000532177 190 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AL162632.2-201ENST00000553933 399 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AL365223.1-201ENST00000574864 1297 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AL138895.2-201ENST00000603019 178 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AC015802.5-201ENST00000607478 399 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms