Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLRN1P58418 TAF9BP2-201ENST00000400856 499 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC6.2□□□□□ -1.42
CLRN1P58418 TMA16P2-201ENST00000413187 601 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 UBE2V1P9-201ENST00000414760 368 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.2□□□□□ -1.42
CLRN1P58418 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CLRN1P58418 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CLRN1P58418 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC6.2□□□□□ -1.42
CLRN1P58418 FTLP17-201ENST00000432567 525 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.2□□□□□ -1.42
CLRN1P58418 AC019185.3-201ENST00000438805 323 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC6.2□□□□□ -1.42
CLRN1P58418 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.2□□□□□ -1.42
CLRN1P58418 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.2□□□□□ -1.42
CLRN1P58418 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.2□□□□□ -1.42
CLRN1P58418 RPSAP48-201ENST00000466509 889 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 AP000805.1-201ENST00000471604 784 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 CBX1P5-201ENST00000475330 559 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 RN7SL563P-201ENST00000481233 298 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 MTCO3P35-201ENST00000485582 781 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 TECRP2-201ENST00000503270 928 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 AC010374.1-201ENST00000503762 1237 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.2□□□□□ -1.42
CLRN1P58418 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.2□□□□□ -1.42
CLRN1P58418 RN7SKP233-201ENST00000517005 110 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.2□□□□□ -1.42
CLRN1P58418 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC6.2□□□□□ -1.42
CLRN1P58418 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC6.2□□□□□ -1.42
CLRN1P58418 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
CLRN1P58418 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.2□□□□□ -1.42
CLRN1P58418 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.2□□□□□ -1.42
CLRN1P58418 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.2□□□□□ -1.42
CLRN1P58418 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.2□□□□□ -1.42
CLRN1P58418 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.2□□□□□ -1.42
CLRN1P58418 AC011193.2-201ENST00000582638 367 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.2□□□□□ -1.42
CLRN1P58418 MIR4786-201ENST00000583954 80 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.2□□□□□ -1.42
CLRN1P58418 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CLRN1P58418 AC107993.1-201ENST00000591343 684 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.2□□□□□ -1.42
CLRN1P58418 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.2□□□□□ -1.42
CLRN1P58418 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.2□□□□□ -1.42
CLRN1P58418 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.2□□□□□ -1.42
CLRN1P58418 AC064807.4-201ENST00000607201 407 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 AC100847.1-201ENST00000611316 481 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 AL161931.1-201ENST00000612768 246 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CLRN1P58418 RN7SL126P-201ENST00000616400 299 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CLRN1P58418 AP003485.2-201ENST00000623636 610 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.2□□□□□ -1.42
CLRN1P58418 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CLRN1P58418 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC6.2□□□□□ -1.42
CLRN1P58418 CCAT2-201ENST00000630920 1752 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 CDY19P-201ENST00000411668 1613 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 CDY18P-201ENST00000438294 1609 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.2□□□□□ -1.42
CLRN1P58418 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CLRN1P58418 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLRN1P58418 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.2□□□□□ -1.42
CLRN1P58418 AC129502.1-201ENST00000623261 1654 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
CLRN1P58418 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CLRN1P58418 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
CLRN1P58418 NCOA4P3-201ENST00000513203 1877 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLRN1P58418 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CLRN1P58418 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CLRN1P58418 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CLRN1P58418 AC092725.2-201ENST00000567658 1389 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CLRN1P58418 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLRN1P58418 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
CLRN1P58418 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLRN1P58418 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.19□□□□□ -1.42
CLRN1P58418 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLRN1P58418 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLRN1P58418 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.19□□□□□ -1.42
CLRN1P58418 TMEM75-201ENST00000624314 2165 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLRN1P58418 RPL12P13-201ENST00000310055 497 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 RNFT1P3-201ENST00000340898 1052 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CLRN1P58418 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.19□□□□□ -1.42
CLRN1P58418 RNU1-24P-201ENST00000364285 165 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.19□□□□□ -1.42
CLRN1P58418 RNU6-207P-201ENST00000384137 107 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 RNU6-481P-201ENST00000384194 107 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 MIR301B-201ENST00000390813 78 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 RPL9P21-201ENST00000392269 505 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 AL359715.1-201ENST00000404330 555 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 AC107081.1-201ENST00000414975 361 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.19□□□□□ -1.42
CLRN1P58418 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.19□□□□□ -1.42
CLRN1P58418 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.19□□□□□ -1.42
CLRN1P58418 AC115285.1-201ENST00000424879 736 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms