Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SCARNA11.1-201ENST00000516918 132 ntBASIC6.24□□□□□ -1.41
CDH13P55290 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.24□□□□□ -1.41
CDH13P55290 AC130366.1-201ENST00000526505 1192 ntBASIC6.24□□□□□ -1.41
CDH13P55290 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.24□□□□□ -1.41
CDH13P55290 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.24□□□□□ -1.41
CDH13P55290 AC005519.1-201ENST00000554490 601 ntBASIC6.24□□□□□ -1.41
CDH13P55290 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.24□□□□□ -1.41
CDH13P55290 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.24□□□□□ -1.41
CDH13P55290 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.24□□□□□ -1.41
CDH13P55290 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.24□□□□□ -1.41
CDH13P55290 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC6.24□□□□□ -1.41
CDH13P55290 AL008723.3-201ENST00000608926 449 ntBASIC6.24□□□□□ -1.41
CDH13P55290 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDH13P55290 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
CDH13P55290 AC022726.2-201ENST00000634673 547 ntBASIC6.24□□□□□ -1.41
CDH13P55290 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CDH13P55290 AL359976.1-201ENST00000418655 3528 ntBASIC6.24□□□□□ -1.41
CDH13P55290 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH13P55290 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
CDH13P55290 AL353763.1-201ENST00000624467 1628 ntBASIC6.24□□□□□ -1.41
CDH13P55290 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH13P55290 AC009220.2-201ENST00000489759 1751 ntBASIC6.23□□□□□ -1.41
CDH13P55290 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CDH13P55290 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH13P55290 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
CDH13P55290 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
CDH13P55290 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CDH13P55290 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDH13P55290 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH13P55290 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
CDH13P55290 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
CDH13P55290 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.23□□□□□ -1.41
CDH13P55290 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.23□□□□□ -1.41
CDH13P55290 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.23□□□□□ -1.41
CDH13P55290 SNORD35A-201ENST00000363389 86 ntBASIC6.23□□□□□ -1.41
CDH13P55290 LCN1P2-201ENST00000372030 223 ntBASIC6.23□□□□□ -1.41
CDH13P55290 MRPS6P2-201ENST00000381143 370 ntBASIC6.23□□□□□ -1.41
CDH13P55290 AL391419.1-201ENST00000398901 1275 ntBASIC6.23□□□□□ -1.41
CDH13P55290 AL117344.1-201ENST00000407196 616 ntBASIC6.23□□□□□ -1.41
CDH13P55290 RN7SKP281-201ENST00000410472 352 ntBASIC6.23□□□□□ -1.41
CDH13P55290 UBE2V1P14-201ENST00000415815 558 ntBASIC6.23□□□□□ -1.41
CDH13P55290 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.23□□□□□ -1.41
CDH13P55290 PTPN2P1-201ENST00000423212 1072 ntBASIC6.23□□□□□ -1.41
CDH13P55290 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.23□□□□□ -1.41
CDH13P55290 BMP6P1-201ENST00000431230 679 ntBASIC6.23□□□□□ -1.41
CDH13P55290 MED28P4-201ENST00000433137 572 ntBASIC6.23□□□□□ -1.41
CDH13P55290 UBE2V2P3-201ENST00000433562 437 ntBASIC6.23□□□□□ -1.41
CDH13P55290 MRPS21P3-201ENST00000436696 262 ntBASIC6.23□□□□□ -1.41
CDH13P55290 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.23□□□□□ -1.41
CDH13P55290 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.23□□□□□ -1.41
CDH13P55290 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.23□□□□□ -1.41
CDH13P55290 AC135626.1-201ENST00000556983 435 ntBASIC6.23□□□□□ -1.41
CDH13P55290 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.23□□□□□ -1.41
CDH13P55290 AC092718.4-201ENST00000566639 716 ntBASIC6.23□□□□□ -1.41
CDH13P55290 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.23□□□□□ -1.41
CDH13P55290 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.23□□□□□ -1.41
CDH13P55290 AC107993.1-201ENST00000591343 684 ntBASIC6.23□□□□□ -1.41
CDH13P55290 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.23□□□□□ -1.41
CDH13P55290 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.23□□□□□ -1.41
CDH13P55290 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.23□□□□□ -1.41
CDH13P55290 MIR6085-201ENST00000618314 110 ntBASIC6.23□□□□□ -1.41
CDH13P55290 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC6.23□□□□□ -1.41
CDH13P55290 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
CDH13P55290 MAPK10-287ENST00000641217 3037 ntBASIC6.23□□□□□ -1.41
CDH13P55290 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDH13P55290 AKAP17BP-201ENST00000431706 2719 ntBASIC6.23□□□□□ -1.41
CDH13P55290 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH13P55290 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH13P55290 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDH13P55290 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CDH13P55290 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDH13P55290 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH13P55290 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.22□□□□□ -1.41
CDH13P55290 GUCY1B2-204ENST00000531898 1979 ntBASIC6.22□□□□□ -1.41
CDH13P55290 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH13P55290 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDH13P55290 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH13P55290 AC007342.9-201ENST00000623877 1385 ntBASIC6.22□□□□□ -1.41
CDH13P55290 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.22□□□□□ -1.41
CDH13P55290 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDH13P55290 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CDH13P55290 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH13P55290 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CDH13P55290 RN7SKP237-201ENST00000364663 301 ntBASIC6.22□□□□□ -1.41
CDH13P55290 AC245036.1-201ENST00000391727 309 ntBASIC6.22□□□□□ -1.41
CDH13P55290 AL360271.1-201ENST00000395679 510 ntBASIC6.22□□□□□ -1.41
CDH13P55290 AL050305.1-201ENST00000399993 1230 ntBASIC6.22□□□□□ -1.41
CDH13P55290 AL353133.1-201ENST00000407695 401 ntBASIC6.22□□□□□ -1.41
CDH13P55290 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.22□□□□□ -1.41
CDH13P55290 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH13P55290 CDC42P6-201ENST00000421246 576 ntBASIC6.22□□□□□ -1.41
CDH13P55290 AC092106.2-201ENST00000436597 487 ntBASIC6.22□□□□□ -1.41
CDH13P55290 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH13P55290 AC009244.1-201ENST00000450566 258 ntBASIC6.22□□□□□ -1.41
CDH13P55290 AC103563.5-201ENST00000455643 364 ntBASIC6.22□□□□□ -1.41
CDH13P55290 AKR1D1P1-201ENST00000457236 936 ntBASIC6.22□□□□□ -1.41
CDH13P55290 RNU7-157P-201ENST00000459600 66 ntBASIC6.22□□□□□ -1.41
CDH13P55290 RN7SL372P-201ENST00000461982 298 ntBASIC6.22□□□□□ -1.41
CDH13P55290 RN7SL655P-201ENST00000486087 298 ntBASIC6.22□□□□□ -1.41
CDH13P55290 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms