Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
SLC1A1P43005 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
SLC1A1P43005 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.6□□□□□ -1.35
SLC1A1P43005 RNU1-59P-201ENST00000364829 162 ntBASIC6.6□□□□□ -1.35
SLC1A1P43005 SNORA7A-201ENST00000384765 139 ntBASIC6.6□□□□□ -1.35
SLC1A1P43005 RNA5SP155-201ENST00000411154 129 ntBASIC6.6□□□□□ -1.35
SLC1A1P43005 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.6□□□□□ -1.35
SLC1A1P43005 AL645939.3-201ENST00000435408 225 ntBASIC6.6□□□□□ -1.35
SLC1A1P43005 H3F3BP1-201ENST00000440551 403 ntBASIC6.6□□□□□ -1.35
SLC1A1P43005 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.6□□□□□ -1.35
SLC1A1P43005 RN7SL413P-201ENST00000482700 297 ntBASIC6.6□□□□□ -1.35
SLC1A1P43005 AL079303.1-201ENST00000486611 463 ntBASIC6.6□□□□□ -1.35
SLC1A1P43005 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.6□□□□□ -1.35
SLC1A1P43005 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SLC1A1P43005 AC084851.2-201ENST00000530377 364 ntBASIC6.6□□□□□ -1.35
SLC1A1P43005 OR4A6P-201ENST00000534364 970 ntBASIC6.6□□□□□ -1.35
SLC1A1P43005 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.6□□□□□ -1.35
SLC1A1P43005 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.6□□□□□ -1.35
SLC1A1P43005 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.6□□□□□ -1.35
SLC1A1P43005 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.6□□□□□ -1.35
SLC1A1P43005 AC005332.4-201ENST00000592752 579 ntBASIC6.6□□□□□ -1.35
SLC1A1P43005 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.6□□□□□ -1.35
SLC1A1P43005 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.6□□□□□ -1.35
SLC1A1P43005 AL589743.6-201ENST00000611025 117 ntBASIC6.6□□□□□ -1.35
SLC1A1P43005 U1.25-201ENST00000614085 162 ntBASIC6.6□□□□□ -1.35
SLC1A1P43005 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.6□□□□□ -1.35
SLC1A1P43005 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SLC1A1P43005 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SLC1A1P43005 U1.34-201ENST00000618578 162 ntBASIC6.6□□□□□ -1.35
SLC1A1P43005 U1.31-201ENST00000620022 160 ntBASIC6.6□□□□□ -1.35
SLC1A1P43005 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.6□□□□□ -1.35
SLC1A1P43005 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.6□□□□□ -1.35
SLC1A1P43005 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SLC1A1P43005 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.6□□□□□ -1.35
SLC1A1P43005 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
SLC1A1P43005 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SLC1A1P43005 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SLC1A1P43005 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SLC1A1P43005 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.6□□□□□ -1.35
SLC1A1P43005 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.6□□□□□ -1.35
SLC1A1P43005 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SLC1A1P43005 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SLC1A1P43005 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.59□□□□□ -1.35
SLC1A1P43005 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SLC1A1P43005 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SLC1A1P43005 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
SLC1A1P43005 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
SLC1A1P43005 HDAC1P2-201ENST00000453661 1398 ntBASIC6.59□□□□□ -1.35
SLC1A1P43005 AC007159.1-201ENST00000566529 4706 ntBASIC6.59□□□□□ -1.35
SLC1A1P43005 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SLC1A1P43005 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SLC1A1P43005 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.59□□□□□ -1.35
SLC1A1P43005 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SLC1A1P43005 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SLC1A1P43005 AP001541.1-201ENST00000623322 1904 ntBASIC6.59□□□□□ -1.35
SLC1A1P43005 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SLC1A1P43005 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SLC1A1P43005 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SLC1A1P43005 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SLC1A1P43005 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SLC1A1P43005 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.59□□□□□ -1.35
SLC1A1P43005 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.59□□□□□ -1.35
SLC1A1P43005 AL445238.1-204ENST00000400311 463 ntBASIC6.59□□□□□ -1.35
SLC1A1P43005 AL121835.1-201ENST00000404250 354 ntBASIC6.59□□□□□ -1.35
SLC1A1P43005 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.59□□□□□ -1.35
SLC1A1P43005 GAPDHP37-201ENST00000442317 968 ntBASIC6.59□□□□□ -1.35
SLC1A1P43005 NPM1P9-201ENST00000453156 844 ntBASIC6.59□□□□□ -1.35
SLC1A1P43005 RANP2-201ENST00000456833 229 ntBASIC6.59□□□□□ -1.35
SLC1A1P43005 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
SLC1A1P43005 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SLC1A1P43005 SLC25A51P1-201ENST00000468432 871 ntBASIC6.59□□□□□ -1.35
SLC1A1P43005 CYP4F27P-201ENST00000514557 494 ntBASIC6.59□□□□□ -1.35
SLC1A1P43005 RN7SKP67-201ENST00000515905 235 ntBASIC6.59□□□□□ -1.35
SLC1A1P43005 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.59□□□□□ -1.35
SLC1A1P43005 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.59□□□□□ -1.35
SLC1A1P43005 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.59□□□□□ -1.35
SLC1A1P43005 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
SLC1A1P43005 OR6M2P-201ENST00000529831 871 ntBASIC6.59□□□□□ -1.35
SLC1A1P43005 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.59□□□□□ -1.35
SLC1A1P43005 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.59□□□□□ -1.35
SLC1A1P43005 AC023080.1-201ENST00000551663 931 ntBASIC6.59□□□□□ -1.35
SLC1A1P43005 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SLC1A1P43005 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.59□□□□□ -1.35
SLC1A1P43005 RN7SL475P-201ENST00000583379 298 ntBASIC6.59□□□□□ -1.35
SLC1A1P43005 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.59□□□□□ -1.35
SLC1A1P43005 Z93930.3-201ENST00000607919 749 ntBASIC6.59□□□□□ -1.35
SLC1A1P43005 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.59□□□□□ -1.36
SLC1A1P43005 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.58□□□□□ -1.36
SLC1A1P43005 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SLC1A1P43005 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SLC1A1P43005 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.58□□□□□ -1.36
SLC1A1P43005 KYNUP2-201ENST00000582280 1329 ntBASIC6.58□□□□□ -1.36
SLC1A1P43005 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
SLC1A1P43005 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SLC1A1P43005 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SLC1A1P43005 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SLC1A1P43005 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SLC1A1P43005 RPL23AP17-201ENST00000401064 499 ntBASIC6.58□□□□□ -1.36
SLC1A1P43005 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SLC1A1P43005 OR52N3P-201ENST00000413417 934 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms