Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 RNA5SP308-201ENST00000362532 115 ntBASIC6.34□□□□□ -1.39
HNF4AP41235 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HNF4AP41235 RNA5SP155-201ENST00000411154 129 ntBASIC6.34□□□□□ -1.39
HNF4AP41235 AL353626.3-201ENST00000413399 657 ntBASIC6.34□□□□□ -1.39
HNF4AP41235 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.34□□□□□ -1.39
HNF4AP41235 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HNF4AP41235 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HNF4AP41235 AP003385.1-201ENST00000426387 893 ntBASIC6.34□□□□□ -1.39
HNF4AP41235 PSMD8P1-201ENST00000436275 769 ntBASIC6.34□□□□□ -1.39
HNF4AP41235 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HNF4AP41235 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.34□□□□□ -1.39
HNF4AP41235 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.34□□□□□ -1.39
HNF4AP41235 RN7SKP196-201ENST00000516267 345 ntBASIC6.34□□□□□ -1.39
HNF4AP41235 KCTD9P4-201ENST00000526766 1166 ntBASIC6.34□□□□□ -1.39
HNF4AP41235 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.34□□□□□ -1.39
HNF4AP41235 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.34□□□□□ -1.39
HNF4AP41235 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.34□□□□□ -1.39
HNF4AP41235 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.34□□□□□ -1.39
HNF4AP41235 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.34□□□□□ -1.39
HNF4AP41235 AC024267.2-201ENST00000582737 417 ntBASIC6.34□□□□□ -1.39
HNF4AP41235 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.34□□□□□ -1.39
HNF4AP41235 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.34□□□□□ -1.39
HNF4AP41235 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.34□□□□□ -1.39
HNF4AP41235 AC091193.1-201ENST00000604640 448 ntBASIC6.34□□□□□ -1.39
HNF4AP41235 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.34□□□□□ -1.39
HNF4AP41235 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HNF4AP41235 AP001264.1-201ENST00000620602 703 ntBASIC6.34□□□□□ -1.39
HNF4AP41235 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HNF4AP41235 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HNF4AP41235 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HNF4AP41235 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HNF4AP41235 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
HNF4AP41235 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HNF4AP41235 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HNF4AP41235 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HNF4AP41235 CUL4AP1-201ENST00000514750 1863 ntBASIC6.34□□□□□ -1.39
HNF4AP41235 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
HNF4AP41235 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
HNF4AP41235 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
HNF4AP41235 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
HNF4AP41235 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
HNF4AP41235 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.4
HNF4AP41235 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HNF4AP41235 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HNF4AP41235 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
HNF4AP41235 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HNF4AP41235 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HNF4AP41235 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HNF4AP41235 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.33□□□□□ -1.4
HNF4AP41235 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HNF4AP41235 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.33□□□□□ -1.4
HNF4AP41235 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.33□□□□□ -1.4
HNF4AP41235 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.33□□□□□ -1.4
HNF4AP41235 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HNF4AP41235 RNF19BPY-201ENST00000458209 1550 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HNF4AP41235 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.33□□□□□ -1.4
HNF4AP41235 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HNF4AP41235 FDPSP5-201ENST00000399474 1057 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 MIR1266-201ENST00000408125 84 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.33□□□□□ -1.4
HNF4AP41235 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.33□□□□□ -1.4
HNF4AP41235 CDC42P6-201ENST00000421246 576 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 AC003989.1-201ENST00000434569 565 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.33□□□□□ -1.4
HNF4AP41235 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.33□□□□□ -1.4
HNF4AP41235 GAPDHP33-201ENST00000443168 1013 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
HNF4AP41235 RPL23AP64-201ENST00000469465 435 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 AC099340.1-201ENST00000475247 599 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 RPS7P11-201ENST00000484240 586 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 AC022415.1-202ENST00000486612 523 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 RPL5P33-201ENST00000487833 905 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.33□□□□□ -1.4
HNF4AP41235 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.33□□□□□ -1.4
HNF4AP41235 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.33□□□□□ -1.4
HNF4AP41235 AC008429.2-201ENST00000523057 864 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 AC084337.1-201ENST00000524809 686 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.33□□□□□ -1.4
HNF4AP41235 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.33□□□□□ -1.4
HNF4AP41235 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.33□□□□□ -1.4
HNF4AP41235 AC025423.2-201ENST00000537570 439 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.33□□□□□ -1.4
HNF4AP41235 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HNF4AP41235 MIR744-201ENST00000578242 98 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.33□□□□□ -1.4
HNF4AP41235 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.33□□□□□ -1.4
HNF4AP41235 AC245052.7-201ENST00000601161 359 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 VN1R81P-201ENST00000602085 372 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 AC036176.3-201ENST00000602456 418 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 SNORD96A-201ENST00000606577 79 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HNF4AP41235 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.33□□□□□ -1.4
HNF4AP41235 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.33□□□□□ -1.4
HNF4AP41235 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HNF4AP41235 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HNF4AP41235 FANCD2P2-201ENST00000437591 1400 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms