Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC106883.1-201ENST00000418805 562 ntBASIC8.76□□□□□ -1.01
RXRBP28702 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
RXRBP28702 AL353662.1-201ENST00000439099 327 ntBASIC8.76□□□□□ -1.01
RXRBP28702 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
RXRBP28702 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC8.76□□□□□ -1.01
RXRBP28702 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
RXRBP28702 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
RXRBP28702 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
RXRBP28702 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC8.76□□□□□ -1.01
RXRBP28702 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC8.76□□□□□ -1.01
RXRBP28702 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC8.76□□□□□ -1.01
RXRBP28702 RN7SKP287-201ENST00000516546 266 ntBASIC8.76□□□□□ -1.01
RXRBP28702 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
RXRBP28702 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC8.76□□□□□ -1.01
RXRBP28702 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
RXRBP28702 AP003396.4-201ENST00000527574 265 ntBASIC8.76□□□□□ -1.01
RXRBP28702 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC8.76□□□□□ -1.01
RXRBP28702 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
RXRBP28702 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC8.76□□□□□ -1.01
RXRBP28702 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC8.76□□□□□ -1.01
RXRBP28702 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC8.76□□□□□ -1.01
RXRBP28702 AC005776.1-201ENST00000603164 290 ntBASIC8.76□□□□□ -1.01
RXRBP28702 SNORA74.4-201ENST00000607595 199 ntBASIC8.76□□□□□ -1.01
RXRBP28702 AC119674.1-220ENST00000641502 1048 ntBASIC8.76□□□□□ -1.01
RXRBP28702 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
RXRBP28702 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.76□□□□□ -1.01
RXRBP28702 AC093536.2-201ENST00000565257 1406 ntBASIC8.76□□□□□ -1.01
RXRBP28702 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RXRBP28702 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
RXRBP28702 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
RXRBP28702 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
RXRBP28702 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
RXRBP28702 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
RXRBP28702 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC8.76□□□□□ -1.01
RXRBP28702 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RXRBP28702 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.76□□□□□ -1.01
RXRBP28702 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RXRBP28702 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
RXRBP28702 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC8.75□□□□□ -1.01
RXRBP28702 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RXRBP28702 MTND4P5-201ENST00000435821 1374 ntBASIC8.75□□□□□ -1.01
RXRBP28702 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC8.75□□□□□ -1.01
RXRBP28702 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RXRBP28702 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC8.75□□□□□ -1.01
RXRBP28702 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC8.75□□□□□ -1.01
RXRBP28702 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC8.75□□□□□ -1.01
RXRBP28702 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RXRBP28702 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RXRBP28702 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
RXRBP28702 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
RXRBP28702 RNU4-23P-201ENST00000362839 140 ntBASIC8.75□□□□□ -1.01
RXRBP28702 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.75□□□□□ -1.01
RXRBP28702 RPA2P2-201ENST00000419698 796 ntBASIC8.75□□□□□ -1.01
RXRBP28702 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC8.75□□□□□ -1.01
RXRBP28702 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC8.75□□□□□ -1.01
RXRBP28702 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC8.75□□□□□ -1.01
RXRBP28702 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC8.75□□□□□ -1.01
RXRBP28702 RRM2P4-201ENST00000441721 562 ntBASIC8.75□□□□□ -1.01
RXRBP28702 AC009237.1-201ENST00000442127 744 ntBASIC8.75□□□□□ -1.01
RXRBP28702 MTND1P33-201ENST00000446251 917 ntBASIC8.75□□□□□ -1.01
RXRBP28702 AP006222.1-205ENST00000450734 457 ntBASIC8.75□□□□□ -1.01
RXRBP28702 OTX2P1-201ENST00000450956 354 ntBASIC8.75□□□□□ -1.01
RXRBP28702 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC8.75□□□□□ -1.01
RXRBP28702 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC8.75□□□□□ -1.01
RXRBP28702 METTL15P1-201ENST00000481421 1045 ntBASIC8.75□□□□□ -1.01
RXRBP28702 MTCYBP35-201ENST00000503630 1137 ntBASIC8.75□□□□□ -1.01
RXRBP28702 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC8.75□□□□□ -1.01
RXRBP28702 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC8.75□□□□□ -1.01
RXRBP28702 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC8.75□□□□□ -1.01
RXRBP28702 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC8.75□□□□□ -1.01
RXRBP28702 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC8.75□□□□□ -1.01
RXRBP28702 OR7E158P-201ENST00000524483 910 ntBASIC8.75□□□□□ -1.01
RXRBP28702 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC8.75□□□□□ -1.01
RXRBP28702 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC8.75□□□□□ -1.01
RXRBP28702 LINC00557-201ENST00000563184 1279 ntBASIC8.75□□□□□ -1.01
RXRBP28702 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC8.75□□□□□ -1.01
RXRBP28702 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC8.75□□□□□ -1.01
RXRBP28702 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC8.75□□□□□ -1.01
RXRBP28702 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC8.75□□□□□ -1.01
RXRBP28702 AC080013.3-201ENST00000606839 578 ntBASIC8.75□□□□□ -1.01
RXRBP28702 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC8.75□□□□□ -1.01
RXRBP28702 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RXRBP28702 AC073488.9-201ENST00000631601 754 ntBASIC8.75□□□□□ -1.01
RXRBP28702 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC8.75□□□□□ -1.01
RXRBP28702 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
RXRBP28702 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
RXRBP28702 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RXRBP28702 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
RXRBP28702 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC8.75□□□□□ -1.01
RXRBP28702 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
RXRBP28702 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RXRBP28702 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RXRBP28702 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RXRBP28702 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC8.75□□□□□ -1.01
RXRBP28702 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RXRBP28702 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RXRBP28702 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
RXRBP28702 AL121835.2-201ENST00000624253 3502 ntBASIC8.75□□□□□ -1.01
RXRBP28702 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RXRBP28702 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms