Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGA1P17096 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGA1P17096 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGA1P17096 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGA1P17096 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.49□□□□□ -1.37
HMGA1P17096 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
HMGA1P17096 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.49□□□□□ -1.37
HMGA1P17096 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
HMGA1P17096 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGA1P17096 GAPDHP23-201ENST00000444823 993 ntBASIC6.49□□□□□ -1.37
HMGA1P17096 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.49□□□□□ -1.37
HMGA1P17096 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 AC084754.1-201ENST00000463466 464 ntBASIC6.49□□□□□ -1.37
HMGA1P17096 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.49□□□□□ -1.37
HMGA1P17096 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.49□□□□□ -1.37
HMGA1P17096 AC060775.1-201ENST00000518241 520 ntBASIC6.49□□□□□ -1.37
HMGA1P17096 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.49□□□□□ -1.37
HMGA1P17096 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.49□□□□□ -1.37
HMGA1P17096 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.49□□□□□ -1.37
HMGA1P17096 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGA1P17096 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.49□□□□□ -1.37
HMGA1P17096 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGA1P17096 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGA1P17096 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.49□□□□□ -1.37
HMGA1P17096 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGA1P17096 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGA1P17096 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
HMGA1P17096 AC024651.2-201ENST00000562480 2098 ntBASIC6.49□□□□□ -1.37
HMGA1P17096 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 MTCO1P28-201ENST00000574177 1528 ntBASIC6.49□□□□□ -1.37
HMGA1P17096 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
HMGA1P17096 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGA1P17096 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
HMGA1P17096 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGA1P17096 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HMGA1P17096 CASC19-238ENST00000641523 1558 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
HMGA1P17096 AP000866.6-201ENST00000638898 3579 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.48□□□□□ -1.37
HMGA1P17096 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
HMGA1P17096 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGA1P17096 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HMGA1P17096 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGA1P17096 AL359195.2-201ENST00000623657 4412 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGA1P17096 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HMGA1P17096 PARP4P1-201ENST00000435945 2337 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGA1P17096 AC110373.1-201ENST00000505994 3505 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGA1P17096 RBMY1HP-201ENST00000382759 1389 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGA1P17096 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGA1P17096 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGA1P17096 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGA1P17096 OR7E25P-201ENST00000344844 931 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 RNA5SP477-201ENST00000362639 119 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 SNORA43.1-201ENST00000364863 140 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HMGA1P17096 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
HMGA1P17096 AL096711.1-201ENST00000404780 554 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.48□□□□□ -1.37
HMGA1P17096 UBE2V1P14-201ENST00000415815 558 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 CYP4F30P-202ENST00000420048 405 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 CDY8P-201ENST00000428380 1279 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.48□□□□□ -1.37
HMGA1P17096 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGA1P17096 SEPT14P12-201ENST00000442280 560 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 AC016908.1-201ENST00000442571 1219 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 CDY20P-201ENST00000447528 1279 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGA1P17096 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HMGA1P17096 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.48□□□□□ -1.37
HMGA1P17096 UGT2A3P7-201ENST00000510485 734 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 AC006499.4-201ENST00000510947 694 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGA1P17096 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGA1P17096 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.48□□□□□ -1.37
HMGA1P17096 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms