Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL6A2P12110 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
COL6A2P12110 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL6A2P12110 MFSD8-256ENST00000641949 1640 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL6A2P12110 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL6A2P12110 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL6A2P12110 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL6A2P12110 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL6A2P12110 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
COL6A2P12110 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.94□□□□□ -1.3
COL6A2P12110 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL6A2P12110 RNU5B-4P-201ENST00000363508 111 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 CD2-201ENST00000369477 478 ntTSL 2 BASIC6.94□□□□□ -1.3
COL6A2P12110 MIR152-201ENST00000385212 87 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
COL6A2P12110 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL6A2P12110 GAPDHP15-201ENST00000398586 975 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.94□□□□□ -1.3
COL6A2P12110 DHFRP2-201ENST00000414224 547 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.94□□□□□ -1.3
COL6A2P12110 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.94□□□□□ -1.3
COL6A2P12110 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC6.94□□□□□ -1.3
COL6A2P12110 VN1R42P-201ENST00000424651 344 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.94□□□□□ -1.3
COL6A2P12110 USP9YP24-201ENST00000434374 697 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 RPS7P2-201ENST00000435134 607 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 OR2L9P-201ENST00000444456 913 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 USP9YP17-201ENST00000444617 696 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 OR6K5P-201ENST00000447050 945 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 AL445669.2-201ENST00000454425 421 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 PABPC1P10-201ENST00000464731 381 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 RPL21P18-201ENST00000469899 480 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 RN7SL392P-201ENST00000473024 299 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.94□□□□□ -1.3
COL6A2P12110 AC004263.1-201ENST00000479327 332 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.94□□□□□ -1.3
COL6A2P12110 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.94□□□□□ -1.3
COL6A2P12110 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC6.94□□□□□ -1.3
COL6A2P12110 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC6.94□□□□□ -1.3
COL6A2P12110 AC004923.2-201ENST00000529649 369 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC6.94□□□□□ -1.3
COL6A2P12110 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC6.94□□□□□ -1.3
COL6A2P12110 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.94□□□□□ -1.3
COL6A2P12110 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.94□□□□□ -1.3
COL6A2P12110 AC092375.1-201ENST00000550410 637 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC6.94□□□□□ -1.3
COL6A2P12110 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.94□□□□□ -1.3
COL6A2P12110 AL356801.1-201ENST00000559320 294 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 AC009097.3-201ENST00000563557 1018 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 RN7SL311P-201ENST00000579858 306 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 MIR4258-201ENST00000580920 91 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 RN7SL25P-201ENST00000583862 260 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.94□□□□□ -1.3
COL6A2P12110 PCNAP1-202ENST00000595299 752 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 AC084373.1-201ENST00000603311 235 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 AC007262.1-201ENST00000604099 321 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 AL049840.6-201ENST00000604583 345 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 AC093673.2-201ENST00000609674 331 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 AL139123.1-201ENST00000612008 430 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL6A2P12110 MIR6736-201ENST00000616799 59 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 AP003789.1-201ENST00000617737 605 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.94□□□□□ -1.3
COL6A2P12110 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.94□□□□□ -1.3
COL6A2P12110 OR7E161P-202ENST00000641994 1033 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.94□□□□□ -1.3
COL6A2P12110 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL6A2P12110 AL359195.2-201ENST00000623657 4412 ntBASIC6.94□□□□□ -1.3
COL6A2P12110 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.94□□□□□ -1.3
COL6A2P12110 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.94□□□□□ -1.3
COL6A2P12110 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL6A2P12110 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL6A2P12110 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
COL6A2P12110 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
COL6A2P12110 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.94□□□□□ -1.3
COL6A2P12110 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.93□□□□□ -1.3
COL6A2P12110 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL6A2P12110 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL6A2P12110 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL6A2P12110 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL6A2P12110 AL356361.1-201ENST00000400943 1459 ntBASIC6.93□□□□□ -1.3
COL6A2P12110 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
COL6A2P12110 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.93□□□□□ -1.3
COL6A2P12110 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.93□□□□□ -1.3
COL6A2P12110 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
COL6A2P12110 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL6A2P12110 SNX18P3-202ENST00000565670 1750 ntBASIC6.93□□□□□ -1.3
COL6A2P12110 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL6A2P12110 AL161901.1-201ENST00000624954 3425 ntBASIC6.93□□□□□ -1.3
COL6A2P12110 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.93□□□□□ -1.3
COL6A2P12110 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COL6A2P12110 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL6A2P12110 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
COL6A2P12110 RNU6-207P-201ENST00000384137 107 ntBASIC6.93□□□□□ -1.3
COL6A2P12110 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COL6A2P12110 LSM5-202ENST00000409292 538 ntTSL 2 BASIC6.93□□□□□ -1.3
COL6A2P12110 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.93□□□□□ -1.3
COL6A2P12110 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.93□□□□□ -1.3
COL6A2P12110 FO393414.1-201ENST00000428697 1184 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms