Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.95□□□□□ -1.3
TPM1P09493 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.95□□□□□ -1.3
TPM1P09493 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC6.95□□□□□ -1.3
TPM1P09493 RPL21P42-201ENST00000488408 464 ntBASIC6.95□□□□□ -1.3
TPM1P09493 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.95□□□□□ -1.3
TPM1P09493 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.95□□□□□ -1.3
TPM1P09493 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.95□□□□□ -1.3
TPM1P09493 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TPM1P09493 NPM1P5-201ENST00000557228 838 ntBASIC6.95□□□□□ -1.3
TPM1P09493 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.95□□□□□ -1.3
TPM1P09493 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.95□□□□□ -1.3
TPM1P09493 AC024451.4-201ENST00000602578 752 ntBASIC6.95□□□□□ -1.3
TPM1P09493 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.95□□□□□ -1.3
TPM1P09493 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.95□□□□□ -1.3
TPM1P09493 AC127071.2-201ENST00000623293 527 ntBASIC6.95□□□□□ -1.3
TPM1P09493 AC061999.1-201ENST00000624454 177 ntBASIC6.95□□□□□ -1.3
TPM1P09493 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.95□□□□□ -1.3
TPM1P09493 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
TPM1P09493 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TPM1P09493 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
TPM1P09493 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
TPM1P09493 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
TPM1P09493 TUBBP10-201ENST00000427668 1301 ntBASIC6.95□□□□□ -1.3
TPM1P09493 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.95□□□□□ -1.3
TPM1P09493 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TPM1P09493 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TPM1P09493 SMG1P5-202ENST00000529428 4219 ntBASIC6.95□□□□□ -1.3
TPM1P09493 SMG1P2-201ENST00000566127 4221 ntBASIC6.95□□□□□ -1.3
TPM1P09493 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TPM1P09493 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TPM1P09493 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TPM1P09493 AC125238.2-201ENST00000430003 1440 ntBASIC6.94□□□□□ -1.3
TPM1P09493 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
TPM1P09493 AC092070.2-203ENST00000598377 3644 ntBASIC6.94□□□□□ -1.3
TPM1P09493 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TPM1P09493 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
TPM1P09493 AC140134.1-201ENST00000511830 3544 ntBASIC6.94□□□□□ -1.3
TPM1P09493 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TPM1P09493 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TPM1P09493 AC074375.1-201ENST00000372993 192 ntBASIC6.94□□□□□ -1.3
TPM1P09493 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.94□□□□□ -1.3
TPM1P09493 MIR433-201ENST00000384837 93 ntBASIC6.94□□□□□ -1.3
TPM1P09493 AL139184.1-202ENST00000422303 222 ntBASIC6.94□□□□□ -1.3
TPM1P09493 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.94□□□□□ -1.3
TPM1P09493 RPL12P16-201ENST00000431098 498 ntBASIC6.94□□□□□ -1.3
TPM1P09493 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.94□□□□□ -1.3
TPM1P09493 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.94□□□□□ -1.3
TPM1P09493 AL139135.2-201ENST00000445040 433 ntBASIC6.94□□□□□ -1.3
TPM1P09493 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.94□□□□□ -1.3
TPM1P09493 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.94□□□□□ -1.3
TPM1P09493 AL445687.2-201ENST00000458156 728 ntBASIC6.94□□□□□ -1.3
TPM1P09493 AC106760.2-201ENST00000504159 619 ntBASIC6.94□□□□□ -1.3
TPM1P09493 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
TPM1P09493 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
TPM1P09493 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.94□□□□□ -1.3
TPM1P09493 AC245052.7-201ENST00000601161 359 ntBASIC6.94□□□□□ -1.3
TPM1P09493 AL008723.3-201ENST00000608926 449 ntBASIC6.94□□□□□ -1.3
TPM1P09493 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
TPM1P09493 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.94□□□□□ -1.3
TPM1P09493 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TPM1P09493 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TPM1P09493 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
TPM1P09493 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TPM1P09493 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
TPM1P09493 AL355834.1-201ENST00000556602 3965 ntBASIC6.94□□□□□ -1.3
TPM1P09493 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TPM1P09493 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
TPM1P09493 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
TPM1P09493 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
TPM1P09493 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TPM1P09493 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TPM1P09493 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
TPM1P09493 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TPM1P09493 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TPM1P09493 SOD1P1-201ENST00000407803 440 ntBASIC6.93□□□□□ -1.3
TPM1P09493 AL451061.1-201ENST00000407887 862 ntBASIC6.93□□□□□ -1.3
TPM1P09493 SNORA11D-201ENST00000408548 128 ntBASIC6.93□□□□□ -1.3
TPM1P09493 SNORA11E-201ENST00000408778 128 ntBASIC6.93□□□□□ -1.3
TPM1P09493 RN7SKP151-201ENST00000410230 316 ntBASIC6.93□□□□□ -1.3
TPM1P09493 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.93□□□□□ -1.3
TPM1P09493 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TPM1P09493 AK3P5-201ENST00000432033 519 ntBASIC6.93□□□□□ -1.3
TPM1P09493 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.93□□□□□ -1.3
TPM1P09493 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.93□□□□□ -1.3
TPM1P09493 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.93□□□□□ -1.3
TPM1P09493 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.93□□□□□ -1.3
TPM1P09493 RPS4XP19-201ENST00000460237 736 ntBASIC6.93□□□□□ -1.3
TPM1P09493 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC6.93□□□□□ -1.3
TPM1P09493 AC093878.1-201ENST00000515630 432 ntBASIC6.93□□□□□ -1.3
TPM1P09493 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.93□□□□□ -1.3
TPM1P09493 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC6.93□□□□□ -1.3
TPM1P09493 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.93□□□□□ -1.3
TPM1P09493 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TPM1P09493 AC126323.4-201ENST00000566935 234 ntBASIC6.93□□□□□ -1.3
TPM1P09493 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.93□□□□□ -1.3
TPM1P09493 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.93□□□□□ -1.3
TPM1P09493 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.93□□□□□ -1.3
TPM1P09493 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TPM1P09493 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.93□□□□□ -1.3
TPM1P09493 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms