Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RETP07949 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.61□□□□□ -1.35
RETP07949 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.61□□□□□ -1.35
RETP07949 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.61□□□□□ -1.35
RETP07949 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
RETP07949 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RETP07949 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RETP07949 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.61□□□□□ -1.35
RETP07949 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RETP07949 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RETP07949 FUNDC2P3-201ENST00000334716 533 ntBASIC6.61□□□□□ -1.35
RETP07949 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.61□□□□□ -1.35
RETP07949 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.61□□□□□ -1.35
RETP07949 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.61□□□□□ -1.35
RETP07949 GAPDHP33-201ENST00000443168 1013 ntBASIC6.61□□□□□ -1.35
RETP07949 RPL6P30-201ENST00000443382 862 ntBASIC6.61□□□□□ -1.35
RETP07949 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.61□□□□□ -1.35
RETP07949 TVP23CP1-201ENST00000450317 639 ntBASIC6.61□□□□□ -1.35
RETP07949 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.61□□□□□ -1.35
RETP07949 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.61□□□□□ -1.35
RETP07949 AC092375.1-201ENST00000550410 637 ntBASIC6.61□□□□□ -1.35
RETP07949 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.61□□□□□ -1.35
RETP07949 MIR4301-201ENST00000577203 66 ntBASIC6.61□□□□□ -1.35
RETP07949 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.61□□□□□ -1.35
RETP07949 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
RETP07949 AL683813.2-201ENST00000605245 502 ntBASIC6.61□□□□□ -1.35
RETP07949 AC016590.3-201ENST00000611171 753 ntBASIC6.61□□□□□ -1.35
RETP07949 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.61□□□□□ -1.35
RETP07949 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.61□□□□□ -1.35
RETP07949 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
RETP07949 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RETP07949 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RETP07949 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RETP07949 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RETP07949 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RETP07949 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RETP07949 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.61□□□□□ -1.35
RETP07949 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.61□□□□□ -1.35
RETP07949 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.6□□□□□ -1.35
RETP07949 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 AC005702.3-201ENST00000585345 1447 ntBASIC6.6□□□□□ -1.35
RETP07949 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.6□□□□□ -1.35
RETP07949 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.6□□□□□ -1.35
RETP07949 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.6□□□□□ -1.35
RETP07949 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
RETP07949 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
RETP07949 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.6□□□□□ -1.35
RETP07949 MIR323A-201ENST00000362199 86 ntBASIC6.6□□□□□ -1.35
RETP07949 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 RPL9P21-201ENST00000392269 505 ntBASIC6.6□□□□□ -1.35
RETP07949 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.6□□□□□ -1.35
RETP07949 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.6□□□□□ -1.35
RETP07949 AL713922.1-201ENST00000416477 747 ntBASIC6.6□□□□□ -1.35
RETP07949 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.6□□□□□ -1.35
RETP07949 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.6□□□□□ -1.35
RETP07949 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.6□□□□□ -1.35
RETP07949 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.6□□□□□ -1.35
RETP07949 AC010240.2-201ENST00000445363 1205 ntBASIC6.6□□□□□ -1.35
RETP07949 AC083806.1-201ENST00000468934 316 ntBASIC6.6□□□□□ -1.35
RETP07949 COX6B1P2-201ENST00000489624 230 ntBASIC6.6□□□□□ -1.35
RETP07949 RN7SL187P-201ENST00000495587 303 ntBASIC6.6□□□□□ -1.35
RETP07949 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.6□□□□□ -1.35
RETP07949 OR52H2P-201ENST00000514607 902 ntBASIC6.6□□□□□ -1.35
RETP07949 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.6□□□□□ -1.35
RETP07949 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.6□□□□□ -1.35
RETP07949 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.6□□□□□ -1.35
RETP07949 AC090022.1-201ENST00000546569 311 ntBASIC6.6□□□□□ -1.35
RETP07949 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.6□□□□□ -1.35
RETP07949 AC008507.3-201ENST00000585753 472 ntBASIC6.6□□□□□ -1.35
RETP07949 AC100767.2-201ENST00000604840 693 ntBASIC6.6□□□□□ -1.35
RETP07949 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.6□□□□□ -1.35
RETP07949 AC024884.1-201ENST00000620583 399 ntBASIC6.6□□□□□ -1.35
RETP07949 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.6□□□□□ -1.35
RETP07949 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.6□□□□□ -1.35
RETP07949 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.6□□□□□ -1.35
RETP07949 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.6□□□□□ -1.35
RETP07949 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 CDY5P-201ENST00000411487 1580 ntBASIC6.6□□□□□ -1.35
RETP07949 CDY9P-201ENST00000451397 1580 ntBASIC6.6□□□□□ -1.35
RETP07949 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.6□□□□□ -1.35
RETP07949 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.6□□□□□ -1.35
RETP07949 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RETP07949 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms