Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RB1P06400 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.91□□□□□ -1.3
RB1P06400 BX322650.1-201ENST00000332359 2143 ntBASIC6.91□□□□□ -1.3
RB1P06400 MTCO1P11-201ENST00000429111 1528 ntBASIC6.91□□□□□ -1.3
RB1P06400 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
RB1P06400 MAPK10-383ENST00000642032 3390 ntBASIC6.91□□□□□ -1.3
RB1P06400 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
RB1P06400 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RB1P06400 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RB1P06400 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RB1P06400 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RB1P06400 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.9□□□□□ -1.3
RB1P06400 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC6.9□□□□□ -1.3
RB1P06400 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RB1P06400 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
RB1P06400 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RB1P06400 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RB1P06400 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
RB1P06400 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RB1P06400 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
RB1P06400 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
RB1P06400 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
RB1P06400 OR7E25P-201ENST00000344844 931 ntBASIC6.9□□□□□ -1.3
RB1P06400 SUGT1P2-201ENST00000379452 992 ntBASIC6.9□□□□□ -1.3
RB1P06400 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
RB1P06400 LYPLA1P3-201ENST00000402650 695 ntBASIC6.9□□□□□ -1.3
RB1P06400 SNORA81-201ENST00000408493 178 ntBASIC6.9□□□□□ -1.3
RB1P06400 MTCO3P17-201ENST00000443775 513 ntBASIC6.9□□□□□ -1.3
RB1P06400 RPL31P15-201ENST00000449770 338 ntBASIC6.9□□□□□ -1.3
RB1P06400 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.9□□□□□ -1.3
RB1P06400 PABPC1P1-201ENST00000506347 591 ntBASIC6.9□□□□□ -1.3
RB1P06400 RNA5SP271-201ENST00000516700 88 ntBASIC6.9□□□□□ -1.3
RB1P06400 OR9L1P-201ENST00000529493 933 ntBASIC6.9□□□□□ -1.3
RB1P06400 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.9□□□□□ -1.3
RB1P06400 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.9□□□□□ -1.3
RB1P06400 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.9□□□□□ -1.3
RB1P06400 AC073046.2-201ENST00000604756 527 ntBASIC6.9□□□□□ -1.3
RB1P06400 AC015849.6-201ENST00000605454 474 ntBASIC6.9□□□□□ -1.3
RB1P06400 MIR6768-201ENST00000610734 72 ntBASIC6.9□□□□□ -1.3
RB1P06400 AC018659.2-201ENST00000624690 715 ntBASIC6.9□□□□□ -1.3
RB1P06400 AC183089.2-201ENST00000637931 916 ntBASIC6.9□□□□□ -1.3
RB1P06400 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
RB1P06400 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
RB1P06400 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.9□□□□□ -1.31
RB1P06400 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.9□□□□□ -1.31
RB1P06400 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.9□□□□□ -1.31
RB1P06400 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RB1P06400 AL353743.3-201ENST00000442109 1468 ntBASIC6.9□□□□□ -1.31
RB1P06400 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.9□□□□□ -1.31
RB1P06400 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.31
RB1P06400 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.9□□□□□ -1.31
RB1P06400 AL359694.2-201ENST00000567753 1615 ntBASIC6.9□□□□□ -1.31
RB1P06400 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RB1P06400 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.9□□□□□ -1.31
RB1P06400 AL449283.1-201ENST00000602631 3403 ntBASIC6.89□□□□□ -1.31
RB1P06400 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
RB1P06400 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RB1P06400 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.89□□□□□ -1.31
RB1P06400 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.89□□□□□ -1.31
RB1P06400 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
RB1P06400 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RB1P06400 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.89□□□□□ -1.31
RB1P06400 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RB1P06400 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.89□□□□□ -1.31
RB1P06400 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.89□□□□□ -1.31
RB1P06400 RPS21P8-201ENST00000413365 247 ntBASIC6.89□□□□□ -1.31
RB1P06400 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.89□□□□□ -1.31
RB1P06400 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.89□□□□□ -1.31
RB1P06400 RPL23AP85-201ENST00000421838 433 ntBASIC6.89□□□□□ -1.31
RB1P06400 AC244033.1-201ENST00000426826 870 ntBASIC6.89□□□□□ -1.31
RB1P06400 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
RB1P06400 ATP5LP2-201ENST00000440646 311 ntBASIC6.89□□□□□ -1.31
RB1P06400 AC021074.2-201ENST00000468434 172 ntBASIC6.89□□□□□ -1.31
RB1P06400 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.89□□□□□ -1.31
RB1P06400 TPRX1P1-201ENST00000557620 319 ntBASIC6.89□□□□□ -1.31
RB1P06400 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
RB1P06400 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.89□□□□□ -1.31
RB1P06400 AP005136.2-201ENST00000583253 1049 ntBASIC6.89□□□□□ -1.31
RB1P06400 AL356986.1-201ENST00000604085 341 ntBASIC6.89□□□□□ -1.31
RB1P06400 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.89□□□□□ -1.31
RB1P06400 AL450226.2-201ENST00000622913 439 ntBASIC6.89□□□□□ -1.31
RB1P06400 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.89□□□□□ -1.31
RB1P06400 CIR1P2-201ENST00000514821 1342 ntBASIC6.89□□□□□ -1.31
RB1P06400 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.89□□□□□ -1.31
RB1P06400 MFSD8-217ENST00000641178 4374 ntBASIC6.89□□□□□ -1.31
RB1P06400 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
RB1P06400 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RB1P06400 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
RB1P06400 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.89□□□□□ -1.31
RB1P06400 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
RB1P06400 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.89□□□□□ -1.31
RB1P06400 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.89□□□□□ -1.31
RB1P06400 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.89□□□□□ -1.31
RB1P06400 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
RB1P06400 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
RB1P06400 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RB1P06400 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
RB1P06400 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.88□□□□□ -1.31
RB1P06400 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RB1P06400 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms