Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SLC28A1O00337 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SLC28A1O00337 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SLC28A1O00337 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SLC28A1O00337 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.11□□□□□ -1.43
SLC28A1O00337 AC005225.5-201ENST00000623547 2225 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SLC28A1O00337 GUCY1B2-204ENST00000531898 1979 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.11□□□□□ -1.43
SLC28A1O00337 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC28A1O00337 AC078880.4-201ENST00000617627 1749 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC28A1O00337 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.11□□□□□ -1.43
SLC28A1O00337 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SLC28A1O00337 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SLC28A1O00337 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.11□□□□□ -1.43
SLC28A1O00337 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SLC28A1O00337 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SLC28A1O00337 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SLC28A1O00337 SNORD35A-201ENST00000363389 86 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 MIR433-201ENST00000384837 93 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.11□□□□□ -1.43
SLC28A1O00337 RPL23AP18-201ENST00000416139 468 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SLC28A1O00337 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.11□□□□□ -1.43
SLC28A1O00337 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.11□□□□□ -1.43
SLC28A1O00337 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SLC28A1O00337 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SLC28A1O00337 AC092106.2-201ENST00000436597 487 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 COL11A2P1-205ENST00000441798 676 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.11□□□□□ -1.43
SLC28A1O00337 VN1R96P-201ENST00000446052 858 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 AC009244.1-201ENST00000450566 258 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.11□□□□□ -1.43
SLC28A1O00337 RN7SL350P-201ENST00000492591 299 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 BLNK-209ENST00000495266 440 ntTSL 5 BASIC6.11□□□□□ -1.43
SLC28A1O00337 AC073648.3-201ENST00000504939 925 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 AC093870.1-201ENST00000506837 213 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 RNA5SP75-201ENST00000516841 111 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 SCARNA11.1-201ENST00000516918 132 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 AP002004.1-206ENST00000532441 876 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 RPL3P13-201ENST00000550415 216 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 TPRX1P1-201ENST00000557620 319 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 AC007494.1-201ENST00000562293 760 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC6.11□□□□□ -1.43
SLC28A1O00337 SYPL1P2-201ENST00000582878 727 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.11□□□□□ -1.43
SLC28A1O00337 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SLC28A1O00337 AC099777.1-201ENST00000603779 1070 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 AC012511.1-201ENST00000608140 449 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC28A1O00337 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC28A1O00337 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC28A1O00337 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.11□□□□□ -1.43
SLC28A1O00337 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC28A1O00337 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
SLC28A1O00337 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
SLC28A1O00337 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
SLC28A1O00337 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SLC28A1O00337 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC28A1O00337 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SLC28A1O00337 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC28A1O00337 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.11□□□□□ -1.43
SLC28A1O00337 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SLC28A1O00337 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC28A1O00337 AC004023.1-201ENST00000561473 1744 ntBASIC6.11□□□□□ -1.43
SLC28A1O00337 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SLC28A1O00337 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
SLC28A1O00337 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SLC28A1O00337 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SLC28A1O00337 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SLC28A1O00337 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SLC28A1O00337 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SLC28A1O00337 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SLC28A1O00337 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.1□□□□□ -1.43
SLC28A1O00337 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SLC28A1O00337 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SLC28A1O00337 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.1□□□□□ -1.43
SLC28A1O00337 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SLC28A1O00337 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.1□□□□□ -1.43
SLC28A1O00337 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SLC28A1O00337 AL591135.1-201ENST00000401578 5914 ntBASIC6.1□□□□□ -1.43
SLC28A1O00337 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.1□□□□□ -1.43
SLC28A1O00337 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SLC28A1O00337 OR7A2P-201ENST00000304105 930 ntBASIC6.1□□□□□ -1.43
SLC28A1O00337 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SLC28A1O00337 RNU1-5P-201ENST00000362684 144 ntBASIC6.1□□□□□ -1.43
SLC28A1O00337 RPL12P23-201ENST00000405880 490 ntBASIC6.1□□□□□ -1.43
SLC28A1O00337 AL353133.1-201ENST00000407695 401 ntBASIC6.1□□□□□ -1.43
SLC28A1O00337 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.1□□□□□ -1.43
SLC28A1O00337 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.1□□□□□ -1.43
SLC28A1O00337 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.1□□□□□ -1.43
SLC28A1O00337 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.1□□□□□ -1.43
SLC28A1O00337 AL121578.1-201ENST00000428051 892 ntBASIC6.1□□□□□ -1.43
SLC28A1O00337 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.1□□□□□ -1.43
SLC28A1O00337 BMS1P11-201ENST00000442351 885 ntBASIC6.1□□□□□ -1.43
SLC28A1O00337 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.1□□□□□ -1.43
SLC28A1O00337 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.1□□□□□ -1.43
SLC28A1O00337 AL354872.1-201ENST00000456361 967 ntBASIC6.1□□□□□ -1.43
SLC28A1O00337 BMS1P9-201ENST00000457640 885 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms